RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 TRIM45Q9H8W5 580 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 HPS4Q9NQG7 708 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 KLF11O14901 512 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TADA2AO75478 443 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 MOGSQ13724 837 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 KIZQ2M2Z5 673 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 PDCD4Q53EL6 469 aaKnown RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 STX19Q8N4C7 294 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 CYP2W1Q8TAV3 490 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 ACP6Q9NPH0 428 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 VWA5AO00534 786 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 STX7O15400 261 aaKnown RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 BPGMP07738 259 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 ADSSP30520 456 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 CDKN2BP42772 138 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 GEMP55040 296 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 FASTKD3Q14CZ7 662 aaKnown RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TCEAL1Q15170 157 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 MAPRE1Q15691 268 aaKnown RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 OR8H2Q8N162 312 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 NIPA2Q8N8Q9 360 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 UCMAQ8WVF2 138 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SEPHS2Q99611 448 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 EBNA1BP2Q99848 306 aaKnown RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 FGFBP2Q9BYJ0 223 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 PRKD2Q9BZL6 878 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 PCDHGC3Q9UN70 934 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 PCDHA2Q9Y5H9 948 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 MAST2Q6P0Q8 1798 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 C6orf222P0C671 652 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SUPT20HL2P0C7V6 817 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 ERVK-10P10266 1014 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 GNAZP19086 355 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 MMP8P22894 467 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SHMT1P34896 483 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 IL12RB1P42701 662 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 PPM1FP49593 454 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TAF6P49848 677 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 CDC16Q13042 620 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SPP2Q13103 211 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 PDZK1Q5T2W1 519 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 LUZP2Q86TE4 346 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 KRT73Q86Y46 540 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 NAT8LQ8N9F0 302 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 NKD2Q969F2 451 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 CLPTM1LQ96KA5 538 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 APBA2Q99767 749 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SLC4A5Q9BY07 1137 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SNX15Q9NRS6 342 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 STK32BQ9NY57 414 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TCRBV7S2A1N4TA0A589 114 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 IDO1P14902 403 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 AMPD1P23109 780 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TCF7P36402 384 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 CD151P48509 253 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 BNC1Q01954 994 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 PCSK7Q16549 785 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SEZ6Q53EL9 994 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TTC23Q5W5X9 447 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 MBOAT7Q96N66 472 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 POMKQ9H5K3 350 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TMEM134Q9H6X4 195 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 GPBP1L1Q9HC44 474 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TJP2Q9UDY2 1190 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 AREL1O15033 823 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 EPHA3P29320 983 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 ATP13A4Q4VNC1 1196 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TNS4Q8IZW8 715 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 AHI1Q8N157 1196 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 FAM47BQ8NA70 645 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SEPT8Q92599 483 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 ZFYVE19Q96K21 471 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 PWWP2AQ96N64 755 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 CIB1Q99828 191 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 NOCTQ9UK39 431 aaKnown RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 PIGNO95427 931 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 PIK3R1P27986 724 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 GNL1P36915 607 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 PKNOX1P55347 436 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 IL5RAQ01344 420 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SLC6A3Q01959 620 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 TDRD10Q5VZ19 366 aaKnown RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 AKAP14Q86UN6 197 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 ANAPC2Q9UJX6 822 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 FNDC3AQ9Y2H6 1198 aaKnown RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 COPG1Q9Y678 874 aaKnown RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 KIF13AQ9H1H9 1805 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 DHRS12A0PJE2 317 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 C2orf71A6NGG8 1288 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 UBAP1LF5GYI3 381 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 MRASO14807 208 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 KCNQ2O43526 872 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 HERC6Q8IVU3 1022 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SCUBE3Q8IX30 993 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 C19orf18Q8NEA5 215 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 PPP1R10Q96QC0 940 aaKnown RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 FAM124BQ9H5Z6 455 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 MOV10Q9HCE1 1003 aaKnown RBP4.87□□□□□ -1.63
CSMD3-203ENST00000343508 NDFIP2Q9NV92 336 aa4.87□□□□□ -1.63
CSMD3-203ENST00000343508 SLC7A8Q9UHI5 535 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms