RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 EIF6P56537 245 aaKnown RBP18.9■□□□□ 0.62
SMPD1-201ENST00000342245 MRPS9P82933 396 aaKnown RBP18.9■□□□□ 0.62
SMPD1-201ENST00000342245 PPM1LQ5SGD2 360 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 RSBN1LQ6PCB5 846 aaPredicted RBP18.9■□□□□ 0.62
SMPD1-201ENST00000342245 AGMOQ6ZNB7 445 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 HEATR4Q86WZ0 1026 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 HERC6Q8IVU3 1022 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 YME1L1Q96TA2 773 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 CIB1Q99828 191 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 CYP26B1Q9NR63 512 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 PCDHGC3Q9UN70 934 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 AHDC1Q5TGY3 1603 aaPredicted RBP18.9■□□□□ 0.62
SMPD1-201ENST00000342245 TCRBV3S1A0A5B6 114 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 GOLGA8IPA6NC78 632 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 GOLGA8JA6NMD2 632 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 MSI1O43347 362 aaKnown RBP18.9■□□□□ 0.62
SMPD1-201ENST00000342245 AVILO75366 819 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 NTRK1P04629 796 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 HPCAL1P37235 193 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 SCNN1DP51172 638 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 ADAM17P78536 824 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 IFITM2Q01629 132 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 SLC9B1Q4ZJI4 515 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 BRDTQ58F21 947 aaPredicted RBP18.9■□□□□ 0.62
SMPD1-201ENST00000342245 FAAH2Q6GMR7 532 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 TATDN1Q6P1N9 297 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 DCAF4Q8WV16 495 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 SH3YL1Q96HL8 342 aaPredicted RBP18.9■□□□□ 0.62
SMPD1-201ENST00000342245 FEM1CQ96JP0 617 aa18.9■□□□□ 0.62
SMPD1-201ENST00000342245 P2RX7Q99572 595 aaKnown RBP18.9■□□□□ 0.62
SMPD1-201ENST00000342245 THG1LQ9NWX6 298 aaKnown RBP18.9■□□□□ 0.62
SMPD1-201ENST00000342245 SAE1Q9UBE0 346 aaPredicted RBP18.9■□□□□ 0.62
SMPD1-201ENST00000342245 ILVBLA1L0T0 632 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 C9IYK1 514 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 GAS7O60861 476 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 JRKO75564 520 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 TGM1P22735 817 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 EEF1DP29692 281 aaKnown RBP18.89■□□□□ 0.61
SMPD1-201ENST00000342245 MAGEA6P43360 314 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 GABPAQ06546 454 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 NAB1Q13506 487 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 SLC10A5Q5PT55 438 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 MCUQ8NE86 351 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 ZSWIM2Q8NEG5 633 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 MCEEQ96PE7 176 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 ADI1Q9BV57 179 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 IRS2Q9Y4H2 1338 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 CHMP2AO43633 222 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 NUAK1O60285 661 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 KDELR1P24390 212 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 MERTKQ12866 999 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 FAM98CQ17RN3 349 aaKnown RBP18.89■□□□□ 0.61
SMPD1-201ENST00000342245 SIGIRRQ6IA17 410 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 C4orf22Q6V702 233 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 UNC5AQ6ZN44 842 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 CHSY3Q70JA7 882 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 ANKRD13AQ8IZ07 590 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 TRIB2Q92519 343 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 MAGED4Q96JG8 741 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 ZFYVE28Q9HCC9 887 aa18.89■□□□□ 0.61
SMPD1-201ENST00000342245 CLOCKO15516 846 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 CSPG5O95196 566 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 ENO2P09104 434 aaPredicted RBP18.88■□□□□ 0.61
SMPD1-201ENST00000342245 MZF1P28698 734 aaPredicted RBP18.88■□□□□ 0.61
SMPD1-201ENST00000342245 MSX2P35548 267 aaPredicted RBP18.88■□□□□ 0.61
SMPD1-201ENST00000342245 TPTEP56180 551 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 NME3Q13232 169 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 SLC36A3Q495N2 470 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 TXNRD3NBQ6F5E7 133 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 DARS2Q6PI48 645 aaKnown RBP18.88■□□□□ 0.61
SMPD1-201ENST00000342245 CCDC60Q8IWA6 550 aaPredicted RBP18.88■□□□□ 0.61
SMPD1-201ENST00000342245 FBXL18Q96ME1 805 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 HOXD1Q9GZZ0 328 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 PKD2L2Q9NZM6 624 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 SLC9A2Q9UBY0 812 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 TCAF1Q9Y4C2 921 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 TCRBV5S1A1TA0A578 114 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 SLC15A5A6NIM6 579 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 LSM8O95777 96 aaKnown RBP18.88■□□□□ 0.61
SMPD1-201ENST00000342245 HLCSP50747 726 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 PRKCQQ04759 706 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 CYP24A1Q07973 514 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 USP43Q70EL4 1123 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 SPERTQ8NA61 448 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 SEPT8Q92599 483 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 ZNF486Q96H40 463 aaPredicted RBP18.88■□□□□ 0.61
SMPD1-201ENST00000342245 TXNDC15Q96J42 360 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 HERC2P3Q9BVR0 1158 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 NOL11Q9H8H0 719 aaKnown RBP18.88■□□□□ 0.61
SMPD1-201ENST00000342245 ARMC1Q9NVT9 282 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 SMOXQ9NWM0 555 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 TMA7Q9Y2S6 64 aaKnown RBP18.88■□□□□ 0.61
SMPD1-201ENST00000342245 PCDHA11Q9Y5I1 949 aa18.88■□□□□ 0.61
SMPD1-201ENST00000342245 KPNA7A9QM74 516 aa18.87■□□□□ 0.61
SMPD1-201ENST00000342245 SEC14L2O76054 403 aa18.87■□□□□ 0.61
SMPD1-201ENST00000342245 TPPPO94811 219 aa18.87■□□□□ 0.61
SMPD1-201ENST00000342245 UGT2B4P06133 528 aa18.87■□□□□ 0.61
SMPD1-201ENST00000342245 RFX6Q8HWS3 928 aa18.87■□□□□ 0.61
SMPD1-201ENST00000342245 LXNQ9BS40 222 aa18.87■□□□□ 0.61
SMPD1-201ENST00000342245 ZNF385DQ9H6B1 395 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms