RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 MLPHQ9BV36 600 aaPredicted RBP20.58■□□□□ 0.89
SPG7-202ENST00000341316 MARCOQ9UEW3 520 aaPredicted RBP20.58■□□□□ 0.89
SPG7-202ENST00000341316 GABRQQ9UN88 632 aa20.58■□□□□ 0.89
SPG7-202ENST00000341316 RPS6KL1Q9Y6S9 549 aa20.58■□□□□ 0.89
SPG7-202ENST00000341316 F8W810 466 aa20.58■□□□□ 0.88
SPG7-202ENST00000341316 GPR182O15218 404 aa20.58■□□□□ 0.88
SPG7-202ENST00000341316 SNNO75324 88 aaPredicted RBP20.58■□□□□ 0.88
SPG7-202ENST00000341316 LRIG2O94898 1065 aa20.58■□□□□ 0.88
SPG7-202ENST00000341316 AP2A1O95782 977 aa20.58■□□□□ 0.88
SPG7-202ENST00000341316 ITGA2BP08514 1039 aa20.58■□□□□ 0.88
SPG7-202ENST00000341316 KPNB1Q14974 876 aaKnown RBP20.58■□□□□ 0.88
SPG7-202ENST00000341316 RCN1Q15293 331 aa20.58■□□□□ 0.88
SPG7-202ENST00000341316 MUM1Q2TAK8 710 aa20.58■□□□□ 0.88
SPG7-202ENST00000341316 ATG16L1Q676U5 607 aa20.58■□□□□ 0.88
SPG7-202ENST00000341316 FAM171BQ6P995 826 aa20.58■□□□□ 0.88
SPG7-202ENST00000341316 ARID3BQ8IVW6 561 aaPredicted RBP20.58■□□□□ 0.88
SPG7-202ENST00000341316 TRIM42Q8IWZ5 723 aa20.58■□□□□ 0.88
SPG7-202ENST00000341316 CDKL2Q92772 493 aa20.58■□□□□ 0.88
SPG7-202ENST00000341316 STOML1Q9UBI4 398 aa20.58■□□□□ 0.88
SPG7-202ENST00000341316 KRT36O76013 467 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 PRKCGP05129 697 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 KITP10721 976 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 GALNT2Q10471 571 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 CCDC6Q16204 474 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 ARL13BQ3SXY8 428 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 ACSBG2Q5FVE4 666 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 PPM1JQ5JR12 505 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 KCTD11Q693B1 232 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 PM20D1Q6GTS8 502 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 PDZD4Q76G19 769 aaPredicted RBP20.57■□□□□ 0.88
SPG7-202ENST00000341316 RASSF3Q86WH2 238 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 OR10T2Q8NGX3 314 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 PKMYT1Q99640 499 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 LBHD1Q9BQE6 289 aaPredicted RBP20.57■□□□□ 0.88
SPG7-202ENST00000341316 NAT9Q9BTE0 207 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 NMUR2Q9GZQ4 415 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 ZFYVE28Q9HCC9 887 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 NMRK1Q9NWW6 199 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 FCHO1O14526 889 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 ITGB1P05556 798 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 POLBP06746 335 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 ODC1P11926 461 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 N4BP2L1Q5TBK1 243 aaPredicted RBP20.57■□□□□ 0.88
SPG7-202ENST00000341316 SCAMP5Q8TAC9 235 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 MCUR1Q96AQ8 359 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 HDAC11Q96DB2 347 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 CERS2Q96G23 380 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 CELF6Q96J87 481 aaKnown RBP20.57■□□□□ 0.88
SPG7-202ENST00000341316 ARMCX1Q9P291 453 aa20.57■□□□□ 0.88
SPG7-202ENST00000341316 NVLO15381 856 aaKnown RBP20.56■□□□□ 0.88
SPG7-202ENST00000341316 BIRC5O15392 142 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 MYCNP04198 464 aaPredicted RBP20.56■□□□□ 0.88
SPG7-202ENST00000341316 ESRRAP11474 423 aaPredicted RBP20.56■□□□□ 0.88
SPG7-202ENST00000341316 GARSP41250 739 aaKnown RBP20.56■□□□□ 0.88
SPG7-202ENST00000341316 GRIK3Q13003 919 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 FASTKD1Q53R41 847 aaKnown RBP20.56■□□□□ 0.88
SPG7-202ENST00000341316 INTS6LQ5JSJ4 861 aaKnown RBP20.56■□□□□ 0.88
SPG7-202ENST00000341316 KYAT3Q6YP21 454 aaKnown RBP20.56■□□□□ 0.88
SPG7-202ENST00000341316 SAPCD2Q86UD0 394 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 ZSCAN18Q8TBC5 510 aaPredicted RBP20.56■□□□□ 0.88
SPG7-202ENST00000341316 ZNF333Q96JL9 665 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 ZIC5Q96T25 663 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 APOL2Q9BQE5 337 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 ACBD6Q9BR61 282 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 UPF3AQ9H1J1 476 aaKnown RBP20.56■□□□□ 0.88
SPG7-202ENST00000341316 TAS2R1Q9NYW7 299 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 MAGED2Q9UNF1 606 aaPredicted RBP20.56■□□□□ 0.88
SPG7-202ENST00000341316 RAD54BQ9Y620 910 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 DPPA5A6NC42 116 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 NCAM2O15394 837 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 F9P00740 461 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 NFKB1P19838 968 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 VHLP40337 213 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 PEX19P40855 299 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 PGFP49763 221 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 KRT72Q14CN4 511 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 CERCAMQ5T4B2 595 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 RGMBQ6NW40 437 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 ACMSDQ8TDX5 336 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 DQX1Q8TE96 717 aaKnown RBP20.56■□□□□ 0.88
SPG7-202ENST00000341316 DPF3Q92784 378 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 GBA3Q9H227 469 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 CASS4Q9NQ75 786 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 KCNK4Q9NYG8 393 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 RRN3Q9NYV6 651 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 VANGL2Q9ULK5 521 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 INPP5FQ9Y2H2 1132 aa20.56■□□□□ 0.88
SPG7-202ENST00000341316 E2F8A0AVK6 867 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 ZNF623O75123 536 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 RPL10AP62906 217 aaKnown RBP20.55■□□□□ 0.88
SPG7-202ENST00000341316 STX3Q13277 289 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 DSC3Q14574 896 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 SPANXN3Q5MJ09 141 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 NAIF1Q69YI7 327 aaPredicted RBP20.55■□□□□ 0.88
SPG7-202ENST00000341316 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.55■□□□□ 0.883e-6■■■■□ 23.9
SPG7-202ENST00000341316 WDR60Q8WVS4 1066 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 AZIN2Q96A70 460 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 ZNF669Q96BR6 464 aaPredicted RBP20.55■□□□□ 0.88
SPG7-202ENST00000341316 AGAP2Q99490 1192 aa20.55■□□□□ 0.88
SPG7-202ENST00000341316 EPAS1Q99814 870 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms