RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 MYO19Q96H55 970 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 HSPA12BQ96MM6 686 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 HAPLN3Q96S86 360 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 TBCBQ99426 244 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 FUCA2Q9BTY2 467 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 SMOC1Q9H4F8 434 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 VANGL2Q9ULK5 521 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 TBC1D30Q9Y2I9 924 aa13.74□□□□□ -0.21
SIRPB3P-201ENST00000340424 CEP192Q8TEP8 1941 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 ENDOD1O94919 500 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 ADCY5O95622 1261 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 DNTTP04053 509 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 ITPKAP23677 461 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 SDC4P31431 198 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 PTPN9P43378 593 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 CLEC16AQ2KHT3 1053 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 DAB2IPQ5VWQ8 1189 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 TCEAL6Q6IPX3 200 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 CXorf57Q6NSI4 855 aaKnown RBP13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 LRSAM1Q6UWE0 723 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 USP30Q70CQ3 517 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 STRADAQ7RTN6 431 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 SETD3Q86TU7 594 aaPredicted RBP13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 TCEAL3Q969E4 200 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 IGSF8Q969P0 613 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 ERLEC1Q96DZ1 483 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 MRGPRX3Q96LB0 322 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 CFAP57Q96MR6 1250 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 AGPAT1Q99943 283 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 C11orf70Q9BRQ4 267 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 RSPH9Q9H1X1 276 aaPredicted RBP13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 RETREG1Q9H6L5 497 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 TMEM9BQ9NQ34 198 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 METTL5Q9NRN9 209 aaKnown RBP13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 ADAM22Q9P0K1 906 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 SLC6A14Q9UN76 642 aa13.73□□□□□ -0.21
SIRPB3P-201ENST00000340424 IGLV3-10A0A075B6K4 115 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 A0A1B0GTH6 734 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 SERPINF2P08697 491 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 PDGFRAP16234 1089 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 RPS14P62263 151 aaKnown RBP13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 GFPT1Q06210 699 aaPredicted RBP13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 ELAVL3Q14576 367 aaKnown RBP13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 ARL13BQ3SXY8 428 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 C2CD6Q53TS8 623 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 C6orf118Q5T5N4 469 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 ZNF783Q6ZMS7 281 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 SLC41A1Q8IVJ1 513 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 C3orf20Q8ND61 904 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 SLC30A5Q8TAD4 765 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 DNASE2BQ8WZ79 361 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 FEM1AQ9BSK4 669 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 C2orf49Q9BVC5 232 aaPredicted RBP13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 ADAM33Q9BZ11 813 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 EDEM3Q9BZQ6 932 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 SIK2Q9H0K1 926 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 SGK2Q9HBY8 427 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 RXFP3Q9NSD7 469 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 TMEM74BQ9NUR3 256 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 SLC25A13Q9UJS0 675 aa13.72□□□□□ -0.21
SIRPB3P-201ENST00000340424 ANKRD62A6NC57 917 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 C2CD4BA6NLJ0 364 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 DRGXA6NNA5 263 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 MEI4A8MW99 385 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 TM4SF5O14894 197 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 TEX33O43247 280 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 SIN3BO75182 1162 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 SERPINC1P01008 464 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 SYPP08247 313 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 KRT3P12035 628 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 DESP17661 470 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 TFE3P19532 575 aaPredicted RBP13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 KRT83P78385 493 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 IRX4P78413 519 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 NRG1Q02297 640 aaPredicted RBP13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 PTP4A2Q12974 167 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 IQCB1Q15051 598 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 SKOR2Q2VWA4 1001 aaPredicted RBP13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 C9orf64Q5T6V5 341 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 MON1BQ7L1V2 547 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 CIR1Q86X95 450 aaPredicted RBP13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 ZNF683Q8IZ20 524 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 RGL4Q8IZJ4 473 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 APCDD1Q8J025 514 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 ZNF366Q8N895 744 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 VCPIP1Q96JH7 1222 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 PCDHB18PQ96TA0 734 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 SELENOOQ9BVL4 669 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 GPR174Q9BXC1 333 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 ZDHHC5Q9C0B5 715 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 BTBD1Q9H0C5 482 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 MUC3BQ9H195 1237 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 CAPN10Q9HC96 672 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 CD93Q9NPY3 652 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 SEPT11Q9NVA2 429 aaKnown RBP13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 PPARGC1AQ9UBK2 798 aaKnown RBP13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 VPS28Q9UK41 221 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 NCKAP1Q9Y2A7 1128 aa13.71□□□□□ -0.21
SIRPB3P-201ENST00000340424 ATXN2Q99700 1313 aaKnown RBP13.7□□□□□ -0.22
SIRPB3P-201ENST00000340424 SYCE3A1L190 88 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms