RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 STK32BQ9NY57 414 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 GTSE1Q9NYZ3 720 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 A0A0A0MRY4 1105 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 C9JVG2 144 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 H3BNX3 289 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 SEC24DO94855 1032 aaPredicted RBP16.49■□□□□ 0.23
SCARB1-202ENST00000339570 CRTAMO95727 393 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 POLBP06746 335 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 ETFBP38117 255 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 MAP3K10Q02779 954 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 POU5F1BQ06416 359 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 ITGA7Q13683 1181 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 LSM12Q3MHD2 195 aaKnown RBP16.49■□□□□ 0.23
SCARB1-202ENST00000339570 PITRM1Q5JRX3 1037 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 LCLAT1Q6UWP7 414 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 ZNF567Q8N184 647 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 SLC2A14Q8TDB8 520 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 DIS3LQ8TF46 1054 aaKnown RBP16.49■□□□□ 0.23
SCARB1-202ENST00000339570 SPATA13Q96N96 652 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 APBA2Q99767 749 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 C2orf40Q9H1Z8 148 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 IL1RL2Q9HB29 575 aa16.49■□□□□ 0.23
SCARB1-202ENST00000339570 GNEQ9Y223 722 aaKnown RBP16.49■□□□□ 0.23
SCARB1-202ENST00000339570 CCNT2O60583 730 aaKnown RBP16.48■□□□□ 0.23
SCARB1-202ENST00000339570 DNAJA2O60884 412 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 C2P06681 752 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 HNRNPLP14866 589 aaKnown RBP eCLIP16.48■□□□□ 0.231e-7■■■■□ 21.9
SCARB1-202ENST00000339570 RBP5P82980 135 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 TBCCQ15814 346 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 PPWD1Q96BP3 646 aaKnown RBP16.48■□□□□ 0.23
SCARB1-202ENST00000339570 PKP2Q99959 881 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 PTPRHQ9HD43 1115 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 NEMP2A6NFY4 417 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 TPST1O60507 370 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 FOXD2O60548 495 aaPredicted RBP16.48■□□□□ 0.23
SCARB1-202ENST00000339570 CDKL1Q00532 357 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 ENPEPQ07075 957 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 KCTD4Q8WVF5 259 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 CDH19Q9H159 772 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 PDZD7Q9H5P4 517 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 CAAP1Q9H8G2 361 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 MTMR10Q9NXD2 777 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 GALNT8Q9NY28 637 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 ITGA11Q9UKX5 1188 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 COL11A1P12107 1806 aaPredicted RBP16.48■□□□□ 0.23
SCARB1-202ENST00000339570 MAGEB3O15480 346 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 GARSP41250 739 aaKnown RBP16.48■□□□□ 0.23
SCARB1-202ENST00000339570 FSCBQ5H9T9 825 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 ARHGAP18Q8N392 663 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 METTL25Q8N6Q8 603 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 KCNK16Q96T55 309 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 FZD8Q9H461 694 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 GMPR2Q9P2T1 348 aaKnown RBP16.48■□□□□ 0.23
SCARB1-202ENST00000339570 COL2A1P02458 1487 aaPredicted RBP16.48■□□□□ 0.23
SCARB1-202ENST00000339570 THSD7AQ9UPZ6 1657 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 ARID2Q68CP9 1835 aa16.48■□□□□ 0.23
SCARB1-202ENST00000339570 H3BSA7 217 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 M0QYT0 321 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 GCATO75600 419 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 GP5P40197 560 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 GRIA4P48058 902 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 GALK1P51570 392 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 ADIGQ0VDE8 80 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 ARL13AQ5H913 290 aaPredicted RBP16.47■□□□□ 0.23
SCARB1-202ENST00000339570 KLHDC10Q6PID8 442 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 GK5Q6ZS86 529 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 ATP6V1E2Q96A05 226 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 EME1Q96AY2 570 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 OTUD5Q96G74 571 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 ZNF670Q9BS34 389 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 SLC4A5Q9BY07 1137 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 TRPV6Q9H1D0 765 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 C1orf21Q9H246 121 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 IL18RAPO95256 599 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 PTPN1P18031 435 aaKnown RBP16.47■□□□□ 0.23
SCARB1-202ENST00000339570 CTBP1Q13363 440 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 USP10Q14694 798 aaKnown RBP16.47■□□□□ 0.23
SCARB1-202ENST00000339570 AAGABQ6PD74 315 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 UGT2A3Q6UWM9 527 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 BNC2Q6ZN30 1099 aaPredicted RBP16.47■□□□□ 0.23
SCARB1-202ENST00000339570 APLFQ8IW19 511 aaPredicted RBP16.47■□□□□ 0.23
SCARB1-202ENST00000339570 MCUQ8NE86 351 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 ZMAT2Q96NC0 199 aaKnown RBP16.47■□□□□ 0.23
SCARB1-202ENST00000339570 NMRAL1Q9HBL8 299 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 ZDHHC2Q9UIJ5 367 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 RUVBL2Q9Y230 463 aaKnown RBP16.47■□□□□ 0.23
SCARB1-202ENST00000339570 SCN1AP35498 2009 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 FAM72CH0Y354 149 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 PGAM1P18669 254 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 PCSK6P29122 969 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 GNL1P36915 607 aaPredicted RBP16.47■□□□□ 0.23
SCARB1-202ENST00000339570 RARS2Q5T160 578 aaKnown RBP16.47■□□□□ 0.23
SCARB1-202ENST00000339570 FAM72AQ5TYM5 149 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 FAM72DQ6L9T8 149 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 MOB2Q70IA6 237 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 FAM72BQ86X60 149 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 LILRA2Q8N149 483 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 LRRC39Q96DD0 335 aa16.47■□□□□ 0.23
SCARB1-202ENST00000339570 QKIQ96PU8 341 aaKnown RBP eCLIP16.47■□□□□ 0.23
SCARB1-202ENST00000339570 TLK1Q9UKI8 766 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms