RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 ZBTB16Q05516 673 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 PTP4A2Q12974 167 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 DCAF17Q5H9S7 520 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 FAM182AQ5T1J6 154 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 C6orf163Q5TEZ5 329 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 FAM109BQ6ICB4 259 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 PPP1R2P3Q6NXS1 205 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 LRRC49Q8IUZ0 686 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ZNF564Q8TBZ8 553 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 EPS8L1Q8TE68 723 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 FAR2Q96K12 515 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 SH3GL1Q99961 368 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 SMYD3Q9H7B4 428 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 ANKMY1Q9P2S6 941 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 CRNNQ9UBG3 495 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 PPARGC1AQ9UBK2 798 aaKnown RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 KIAA1024Q9UPX6 916 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 TRAF6Q9Y4K3 522 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 MAFBQ9Y5Q3 323 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-202ENST00000339438 IVNS1ABPQ9Y6Y0 642 aa5.73□□□□□ -1.49
CSDE1-202ENST00000339438 GSTTP1A0A1W2PQM5 241 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 FAM86B1E9PN63 330 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 MEIS1O00470 390 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 KDM1AO60341 852 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 IL18RAPO95256 599 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 HMGCRP04035 888 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 EIF2S1P05198 315 aaKnown RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 FAM86B2P0C5J1 330 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 GZMAP12544 262 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 SERPINB6P35237 376 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 DPP6P42658 865 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 IGBP1P78318 339 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 FMO1Q01740 532 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 SP4Q02446 784 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 BNIP3Q12983 259 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 CBLBQ13191 982 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 INAVAQ3KP66 663 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 NHSL2Q5HYW2 709 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 C1orf220Q5T0J3 134 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 ZNF746Q6NUN9 644 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 MOXD1Q6UVY6 613 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 NSMFQ6X4W1 530 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 CYP2U1Q7Z449 544 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 FAM160B2Q86V87 743 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 ARHGEF19Q8IW93 802 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 REXO1Q8N1G1 1221 aaKnown RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 CCDC33Q8N5R6 958 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 SPERTQ8NA61 448 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 EXD1Q8NHP7 514 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 HM13Q8TCT9 377 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 ALKBH8Q96BT7 664 aaKnown RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 SLC29A1Q99808 456 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 DCUN1D5Q9BTE7 237 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 RUSC1Q9BVN2 902 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 PLVAPQ9BX97 442 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 ANKRD60Q9BZ19 345 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 SLC13A1Q9BZW2 595 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 C10orf88Q9H8K7 445 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 XAB2Q9HCS7 855 aaKnown RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 C6orf50Q9HD87 102 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 DMAC2Q9NW81 257 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 AGO2Q9UKV8 859 aaKnown RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 ANKRD36A6QL64 1941 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 KDM3AQ9Y4C1 1321 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 NOTOA8MTQ0 251 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 ACOT8O14734 319 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 SLC22A1O15245 554 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 SEPT4O43236 478 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 PSMD10O75832 226 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 FARP2O94887 1054 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 STAMBPO95630 424 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 CCNE2O96020 404 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 EDN1P05305 212 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 PLA2G4BP0C869 781 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 C7P10643 843 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 ACAT1P24752 427 aaKnown RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 ZNF76P36508 570 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 NUMBP49757 651 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 PMS2P3Q13401 168 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 MGAT5BQ3V5L5 792 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 CCDC58Q4VC31 144 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 FAM117BQ6P1L5 589 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 TTC23LQ6PF05 361 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 ARID3BQ8IVW6 561 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 CCDC89Q8N998 374 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 ZNF420Q8TAQ5 688 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 GRK7Q8WTQ7 553 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 CSF3RQ99062 836 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 ANO3Q9BYT9 981 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 AS3MTQ9HBK9 375 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 RAVER2Q9HCJ3 691 aaKnown RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 GID8Q9NWU2 228 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 HOXC10Q9NYD6 342 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 SCN8AQ9UQD0 1980 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 HMX2A2RU54 273 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 C10orf142B7Z368 130 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 DDX39AO00148 427 aaKnown RBP5.72□□□□□ -1.49
CSDE1-202ENST00000339438 CYB561D2O14569 222 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 ZBTB5O15062 677 aa5.72□□□□□ -1.49
CSDE1-202ENST00000339438 MSI1O43347 362 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms