RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 CBLBQ13191 982 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 LRRC8BQ6P9F7 803 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 OTOP3Q7RTS5 596 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 OR52K1Q8NGK4 314 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 IGSF8Q969P0 613 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 LRRC39Q96DD0 335 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 TEKT5Q96M29 485 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 YME1L1Q96TA2 773 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 UBE2OQ9C0C9 1292 aaKnown RBP22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 EIF2B3Q9NR50 452 aaKnown RBP22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 ARHGAP42A6NI28 874 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 MTSS1O43312 755 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 MAFKO60675 156 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 SMAD1Q15797 465 aaKnown RBP22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 FBXL22Q6P050 247 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 TAX1BP1Q86VP1 789 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 CIR1Q86X95 450 aaPredicted RBP22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 ZNF683Q8IZ20 524 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 UNC5BQ8IZJ1 945 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 PPM1NQ8N819 430 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 ATP6V0D2Q8N8Y2 350 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 CENPTQ96BT3 561 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 BTN2A3PQ96KV6 586 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 APOL2Q9BQE5 337 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 MLPHQ9BV36 600 aaPredicted RBP22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 TTLL2Q9BWV7 592 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 GBA3Q9H227 469 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 SMYD2Q9NRG4 433 aa22.96■■□□□ 1.27
PDLIM2-203ENST00000339162 LTBP2Q14767 1821 aa22.95■■□□□ 1.26
PDLIM2-203ENST00000339162 KIAA0355O15063 1070 aa22.95■■□□□ 1.26
PDLIM2-203ENST00000339162 ABLIM3O94929 683 aa22.95■■□□□ 1.26
PDLIM2-203ENST00000339162 CCNB1P14635 433 aa22.95■■□□□ 1.26
PDLIM2-203ENST00000339162 HTR7P34969 479 aa22.95■■□□□ 1.26
PDLIM2-203ENST00000339162 PAPOLAP51003 745 aaKnown RBP22.95■■□□□ 1.26
PDLIM2-203ENST00000339162 TMEM199Q8N511 208 aa22.95■■□□□ 1.26
PDLIM2-203ENST00000339162 DNAJC5GQ8N7S2 189 aa22.95■■□□□ 1.26
PDLIM2-203ENST00000339162 GDAP1Q8TB36 358 aa22.95■■□□□ 1.26
PDLIM2-203ENST00000339162 MYEOVQ96EZ4 313 aa22.95■■□□□ 1.26
PDLIM2-203ENST00000339162 STAMBPL1Q96FJ0 436 aa22.95■■□□□ 1.26
PDLIM2-203ENST00000339162 NOL6Q9H6R4 1146 aaKnown RBP22.95■■□□□ 1.26
PDLIM2-203ENST00000339162 SPG21Q9NZD8 308 aa22.95■■□□□ 1.26
PDLIM2-203ENST00000339162 FETUBQ9UGM5 382 aa22.95■■□□□ 1.26
PDLIM2-203ENST00000339162 UGT1A9O60656 530 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 SPAG6O75602 509 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 GJB5O95377 273 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 STX2P32856 288 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 COG7P83436 770 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 NRG1Q02297 640 aaPredicted RBP22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 LZTR1Q8N653 840 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 KLF6Q99612 283 aaPredicted RBP22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 NACA2Q9H009 215 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 PPCSQ9HAB8 311 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 UGT1A7Q9HAW7 530 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 UGT1A10Q9HAW8 530 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 UGT1A8Q9HAW9 530 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 COMMD8Q9NX08 183 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 SYBUQ9NX95 663 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 TRHDEQ9UKU6 1024 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 SDR42E2A6NKP2 422 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 ZBBXA8MT70 800 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 GOLGA8RI6L899 631 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 IGLV3-27P01718 113 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 MLNP12872 115 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 HMGA1P17096 107 aaKnown RBP22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 CCNCP24863 283 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 DYDC1Q8WWB3 177 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 SLC44A1Q8WWI5 657 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 ARNTL2Q8WYA1 636 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 ZYG11BQ9C0D3 744 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 ACTL7BQ9Y614 415 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 IKBKGQ9Y6K9 419 aa22.94■■□□□ 1.26
PDLIM2-203ENST00000339162 AP2A1O95782 977 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 SPATA31D3P0C874 917 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 LAG3P18627 525 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 KRT4P19013 534 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 CA8P35219 290 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 NR1H3Q13133 447 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 RASA2Q15283 850 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 CES3Q6UWW8 571 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 SPATA31D4Q6ZUB0 917 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 SPATA22Q8NHS9 363 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 ZNF473Q8WTR7 871 aaKnown RBP22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 TSGA13Q96PP4 275 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 VAT1Q99536 393 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 YIPF1Q9Y548 306 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 URODP06132 367 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 INHBAP08476 426 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 QPCTQ16769 361 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 ITPRIPL1Q6GPH6 555 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 NADSYN1Q6IA69 706 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 C16orf59Q7L2K0 433 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 CMTR2Q8IYT2 770 aaKnown RBP22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 GSDMBQ8TAX9 411 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 MZB1Q8WU39 189 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 OXNAD1Q96HP4 312 aaPredicted RBP22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 RPRD1AQ96P16 312 aaPredicted RBP22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 SMC6Q96SB8 1091 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 PCDHA11Q9Y5I1 949 aa22.93■■□□□ 1.26
PDLIM2-203ENST00000339162 LAMA3Q16787 3333 aa22.92■■□□□ 1.26
PDLIM2-203ENST00000339162 ZNF840PA6NDX5 716 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms