RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 DDX50Q9BQ39 737 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CEP41Q9BYV8 373 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 FAM129AQ9BZQ8 928 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TASP1Q9H6P5 420 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 NOL6Q9H6R4 1146 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZNF212Q9UDV6 495 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 STOML2Q9UJZ1 356 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 LSM7Q9UK45 103 aaKnown RBP15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 SH3BP1Q9Y3L3 701 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 C2orf16Q68DN1 1984 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PDE4DIPQ5VU43 2346 aa15.13■□□□□ 0.01
CDK5RAP3-201ENST00000338399 RNF103O00237 685 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 LEFTY2O00292 366 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 LATS1O95835 1130 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 AVPR1AP37288 418 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 SGSHP51688 502 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CAV1Q03135 178 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 WASHC5Q12768 1159 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ANKRD20A2Q5SQ80 823 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ANKRD20A1Q5TYW2 823 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ANKRD20A3Q5VUR7 823 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 Q6ZNB5 142 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PCGF5Q86SE9 256 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CCDC13Q8IYE1 715 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ATPAF2Q8N5M1 289 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CPT1BQ92523 772 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PPP2R3CQ969Q6 453 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CDCA3Q99618 268 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 FUT8Q9BYC5 575 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 SFXN1Q9H9B4 322 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 DONSONQ9NYP3 566 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 A0A0A0MRY4 1105 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZNF197O14709 1029 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 STK10O94804 968 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 OR1E1P30953 314 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CHKAP35790 457 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PAPOLAP51003 745 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 NDST2P52849 883 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CASP8Q14790 479 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 MORF4L2Q15014 288 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 FAXCQ5TGI0 409 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ARHGEF18Q6ZSZ5 1173 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 HDXQ7Z353 690 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ING5Q8WYH8 240 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PWWP2AQ96N64 755 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 SPATA13Q96N96 652 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 RAB6BQ9NRW1 208 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ARHGAP26Q9UNA1 814 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CCL26Q9Y258 94 aa15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 MRPS23Q9Y3D9 190 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 FARP1Q9Y4F1 1045 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 METTL18O95568 372 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CEBPBP17676 345 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CCNCP24863 283 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PTPN3P26045 913 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 MAPKAPK2P49137 400 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CDH4P55283 916 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 DHX9Q08211 1270 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ANKRD22Q5VYY1 191 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 C4orf22Q6V702 233 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 HTR3DQ70Z44 454 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CCDC25Q86WR0 208 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PPIL6Q8IXY8 311 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZNF567Q8N184 647 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TSEN2Q8NCE0 465 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ITFG1Q8TB96 612 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 SH3RF2Q8TEC5 729 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 HMCESQ96FZ2 354 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZSWIM3Q96MP5 696 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TSGA13Q96PP4 275 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 APOL5Q9BWW9 433 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PRO3102Q9H379 93 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZNF576Q9H609 170 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 NSUN3Q9H649 340 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ETNK1Q9HBU6 452 aa15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 DNAJC17Q9NVM6 304 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TCRBV7S3A2A0A539 114 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ARHGAP42A6NI28 874 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 RASA4BC9J798 803 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 NDC80O14777 642 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 RASA4O43374 803 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 MAFKO60675 156 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 RAMP2O60895 175 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 SASH3O75995 380 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZNF33AQ06730 810 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 HYAL1Q12794 435 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 CBX2Q14781 532 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TCEAL5Q5H9L2 206 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 RARS2Q5T160 578 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 SYCP2LQ5T4T6 812 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 POTEHQ6S545 545 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 TMC3Q7Z5M5 1100 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 BBS7Q8IWZ6 715 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 NAT8LQ8N9F0 302 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 PRCCQ92733 491 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 USP13Q92995 863 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 DZANK1Q9NVP4 752 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ZNF510Q9Y2H8 683 aa15.1■□□□□ 0.01
CDK5RAP3-201ENST00000338399 ATP8A1Q9Y2Q0 1164 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms