RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 TTPALQ9BTX7 342 aa5.51□□□□□ -1.53
PRPF4B-201ENST00000337659 VPS11Q9H270 941 aa5.51□□□□□ -1.53
PRPF4B-201ENST00000337659 TLE6Q9H808 572 aa5.51□□□□□ -1.53
PRPF4B-201ENST00000337659 PRDM6Q9NQX0 595 aa5.51□□□□□ -1.53
PRPF4B-201ENST00000337659 ST7Q9NRC1 585 aa5.51□□□□□ -1.53
PRPF4B-201ENST00000337659 GOLGA6AQ9NYA3 693 aa5.51□□□□□ -1.53
PRPF4B-201ENST00000337659 LRRD1A4D1F6 860 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 PRAMEF11O60813 436 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 BRCC3P46736 316 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 KCNJ1P48048 391 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 MAP3K7CLP57077 242 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 PCDH1Q08174 1060 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 CALCOCO2Q13137 446 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 HIF1AQ16665 826 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 DARS2Q6PI48 645 aaKnown RBP5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 CCDC13Q8IYE1 715 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 LEMD2Q8NC56 503 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 GRAMD1AQ96CP6 724 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 P2RY11Q96G91 374 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 PSMB7Q99436 277 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 C1QTNF3Q9BXJ4 246 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 STN1Q9H668 368 aaKnown RBP5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 NSMCE4AQ9NXX6 385 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 SLC12A4Q9UP95 1085 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 ZNF510Q9Y2H8 683 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 PCDHB7Q9Y5E2 793 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 TET1Q8NFU7 2136 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 ZMYND10O75800 440 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 CD160O95971 181 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 CD19P15391 556 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 RBL1P28749 1068 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 CCR1P32246 355 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 CRHR1P34998 444 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 NFKB2Q00653 900 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 DEUP1Q05D60 604 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 SERINC3Q13530 473 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 PDK4Q16654 411 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 LRRC26Q2I0M4 334 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 TYSND1Q2T9J0 566 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 ARL13BQ3SXY8 428 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 ZNF394Q53GI3 561 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 PDZD4Q76G19 769 aaPredicted RBP5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 CNTD1Q8N815 330 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 KDM1BQ8NB78 822 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 GSDMBQ8TAX9 411 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 SCLT1Q96NL6 688 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 FAM49BQ9NUQ9 324 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 MFHAS1Q9Y4C4 1052 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 ZNF840PA6NDX5 716 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 WASH3PC4AMC7 463 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 LRIG2O94898 1065 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 APOEP02649 317 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 ATXN1LP0C7T5 689 aaKnown RBP5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 COL6A2P12110 1019 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 ITGB8P26012 769 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 HOXD9P28356 352 aaPredicted RBP5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 NAP1L1P55209 391 aaKnown RBP5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 USP46P62068 366 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 GALNT1Q10472 559 aaPredicted RBP5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 ORC1Q13415 861 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 MPP2Q14168 576 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 IHHQ14623 411 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 USP41Q3LFD5 358 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 FYB2Q5VWT5 728 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 RNF19BQ6ZMZ0 732 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 KIAA0408Q6ZU52 694 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 C14orf80Q86SX3 495 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 TDHQ8IZJ6 230 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 CYP4X1Q8N118 509 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 DBF4BQ8NFT6 615 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 ZNF461Q8TAF7 563 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 ISG20Q96AZ6 181 aaKnown RBP5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 LMAN2LQ9H0V9 348 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 MYLK2Q9H1R3 596 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 CATSPERBQ9H7T0 1116 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 LRRC40Q9H9A6 602 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 SMYD2Q9NRG4 433 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 OBP2AQ9NY56 170 aa5.5□□□□□ -1.53
PRPF4B-201ENST00000337659 DCDC2CA8MYV0 355 aa5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 E9PAM4 449 aa5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 ERCC2P18074 760 aa5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 ARNTP27540 789 aa5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 TUFMP49411 452 aaKnown RBP5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 PTPN5P54829 565 aa5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 RPL26P61254 145 aaKnown RBP5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 KCNT2Q6UVM3 1135 aa5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 NPNTQ6UXI9 565 aa5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 DSTYKQ6XUX3 929 aa5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 RDH11Q8TC12 318 aa5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 ZNF668Q96K58 619 aaPredicted RBP5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 PRICKLE1Q96MT3 831 aaPredicted RBP5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 XPO6Q96QU8 1125 aaKnown RBP5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 EPAS1Q99814 870 aa5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 FAM126AQ9BYI3 521 aaPredicted RBP5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 SLC25A51Q9H1U9 297 aa5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 MAGEH1Q9H213 219 aa5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 KDM4CQ9H3R0 1056 aa5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 ETNK1Q9HBU6 452 aa5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 SEPT11Q9NVA2 429 aaKnown RBP5.49□□□□□ -1.53
PRPF4B-201ENST00000337659 KLHL42Q9P2K6 505 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms