RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 IL1BP01584 269 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 GOT1P17174 413 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 C5AR1P21730 350 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 CTSOP43234 321 aaPredicted RBP11□□□□□ -0.65
CAPN3-202ENST00000337571 GALCP54803 685 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 BPIFB4P59827 614 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 RACK1P63244 317 aaKnown RBP11□□□□□ -0.65
CAPN3-202ENST00000337571 NME3Q13232 169 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 CAMK2BQ13554 666 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 TAF5Q15542 800 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 ACCSLQ4AC99 568 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 OR6B2Q6IFH4 312 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 C11orf57Q6ZUT1 292 aaPredicted RBP11□□□□□ -0.65
CAPN3-202ENST00000337571 DSG4Q86SJ6 1040 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 PASD1Q8IV76 773 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 APCDD1Q8J025 514 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 DEFB106AQ8N104 65 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 CCAR2Q8N163 923 aaKnown RBP11□□□□□ -0.65
CAPN3-202ENST00000337571 OR2T34Q8NGX1 318 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 IGSF8Q969P0 613 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 MYEOVQ96EZ4 313 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 RPRD1AQ96P16 312 aaPredicted RBP11□□□□□ -0.65
CAPN3-202ENST00000337571 NEUROG2Q9H2A3 272 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 ACP6Q9NPH0 428 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 ASNSD1Q9NWL6 643 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 CYTH4Q9UIA0 394 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 XPO7Q9UIA9 1087 aaKnown RBP11□□□□□ -0.65
CAPN3-202ENST00000337571 SLCO3A1Q9UIG8 710 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 SLC25A13Q9UJS0 675 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 FNDC3AQ9Y2H6 1198 aaKnown RBP11□□□□□ -0.65
CAPN3-202ENST00000337571 MUC22E2RYF6 1773 aaPredicted RBP11□□□□□ -0.65
CAPN3-202ENST00000337571 DMXL2Q8TDJ6 3036 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 USP24Q9UPU5 2620 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 ZFHX4Q86UP3 3567 aa11□□□□□ -0.65
CAPN3-202ENST00000337571 TBC1D3DA0A087WVF3 549 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 TBC1D3IA0A087WXS9 549 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 TBC1D3EA0A087X179 549 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 TBC1D3KA0A087X1G2 549 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-202ENST00000337571 A0A1B0GVM2 712 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 A0A1W2PPC4 97 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 TBC1D3FA6NER0 549 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-202ENST00000337571 TCAF2A6NFQ2 919 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 SRRM3A6NNA2 597 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-202ENST00000337571 TBC1D3LB9A6J9 549 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 PES1O00541 588 aaKnown RBP10.99□□□□□ -0.65
CAPN3-202ENST00000337571 VILLO15195 856 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 CBFA2T3O75081 653 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 GRAP2O75791 330 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 IGLV3-25P01717 112 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 TBC1D3HP0C7X1 549 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 PDGFRAP16234 1089 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 ZNF18P17022 549 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 PON1P27169 355 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 GRK6P43250 576 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 PSMD8P48556 350 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 CCT8P50990 548 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 BNC1Q01954 994 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 ZNF177Q13360 481 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-202ENST00000337571 ELAVL3Q14576 367 aaKnown RBP10.99□□□□□ -0.65
CAPN3-202ENST00000337571 SLC45A4Q5BKX6 768 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 FAM46CQ5VWP2 391 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 TBC1D3GQ6DHY5 549 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 SMYD5Q6GMV2 418 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 TBC1D3CQ6IPX1 549 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 NCEH1Q6PIU2 408 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 DBX2Q6ZNG2 339 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 SLCO6A1Q86UG4 719 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 TBC1D3Q8IZP1 549 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-202ENST00000337571 STK40Q8N2I9 435 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 WDTC1Q8N5D0 677 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 OR14C36Q8NHC7 312 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 SHC3Q92529 594 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 MYO19Q96H55 970 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 CPXM1Q96SM3 734 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 KRTAP3-3Q9BYR6 98 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 KRTAP3-2Q9BYR7 98 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 AASDHPPTQ9NRN7 309 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 WDR70Q9NW82 654 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 DACH1Q9UI36 760 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 DNAJC12Q9UKB3 198 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 TPX2Q9ULW0 747 aaKnown RBP10.99□□□□□ -0.65
CAPN3-202ENST00000337571 PCDHGC3Q9UN70 934 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 PAXBP1Q9Y5B6 917 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 CACNA1EQ15878 2313 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 SPEGQ15772 3267 aa10.99□□□□□ -0.65
CAPN3-202ENST00000337571 TMEM131Q92545 1883 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 BECN2A8MW95 431 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 M0QYT0 321 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 IGHV4-34P06331 123 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 PRKCSHP14314 528 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-202ENST00000337571 CD38P28907 300 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 NOS2P35228 1153 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 PLK1P53350 603 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 SLC6A3Q01959 620 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 AUHQ13825 339 aaKnown RBP10.98□□□□□ -0.65
CAPN3-202ENST00000337571 MAN2A1Q16706 1144 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 FBXL22Q6P050 247 aa10.98□□□□□ -0.65
CAPN3-202ENST00000337571 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.98□□□□□ -0.65
CAPN3-202ENST00000337571 FAM183BPQ6ZVS7 135 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms