RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 CLIC5Q9NZA1 410 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 TAGLN3Q9UI15 199 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 DSEQ9UL01 958 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 FAM50BQ9Y247 325 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 SSX2IPQ9Y2D8 614 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 PLLPQ9Y342 182 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 SNX13Q9Y5W8 968 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 MYOCOSA0A1B0GUC4 107 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 ZBBXA8MT70 800 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 TMEM233B4DJY2 109 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 AGRPO00253 132 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 PTPN1P18031 435 aaKnown RBP8.41□□□□□ -1.06
HPS4-201ENST00000336873 SLC34A1Q06495 639 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 COL9A2Q14055 689 aaPredicted RBP8.41□□□□□ -1.06
HPS4-201ENST00000336873 ZNF484Q5JVG2 852 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 FAM219BQ5XKK7 198 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 TMPRSS6Q8IU80 811 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 ULK2Q8IYT8 1036 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 ZNF781Q8N8C0 355 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 TUBB6Q9BUF5 446 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 FTHL17Q9BXU8 183 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 CAAP1Q9H8G2 361 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 TCF7L2Q9NQB0 619 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.41□□□□□ -1.06
HPS4-201ENST00000336873 ITGA11Q9UKX5 1188 aa8.41□□□□□ -1.06
HPS4-201ENST00000336873 ATXN2Q99700 1313 aaKnown RBP8.4□□□□□ -1.06
HPS4-201ENST00000336873 FAM72CH0Y354 149 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 MAP3K13O43283 966 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 AKAP10O43572 662 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 PEX11AO75192 247 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 THP07101 528 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 GCAP28676 217 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 PTPN7P35236 360 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 CRYMQ14894 314 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 DDR2Q16832 855 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 FAM83EQ2M2I3 478 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 PPM1LQ5SGD2 360 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 FAM72AQ5TYM5 149 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 FAM72DQ6L9T8 149 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 TRNP1Q6NT89 227 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 FAM72BQ86X60 149 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 SPATA2LQ8IUW3 424 aaPredicted RBP8.4□□□□□ -1.06
HPS4-201ENST00000336873 OR52K2Q8NGK3 314 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 SHKBP1Q8TBC3 707 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 UTP4Q969X6 686 aaKnown RBP8.4□□□□□ -1.06
HPS4-201ENST00000336873 CERS2Q96G23 380 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 VPS39Q96JC1 886 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 MIPEPQ99797 713 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 PAAF1Q9BRP4 392 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 TMEM109Q9BVC6 243 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 ILKAPQ9H0C8 392 aaPredicted RBP8.4□□□□□ -1.06
HPS4-201ENST00000336873 TSPYL2Q9H2G4 693 aaPredicted RBP8.4□□□□□ -1.06
HPS4-201ENST00000336873 FZD8Q9H461 694 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 MROH8Q9H579 483 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 CYP3A43Q9HB55 503 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 SNX15Q9NRS6 342 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 THAP1Q9NVV9 213 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 ARHGEF38Q9NXL2 777 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 SOX13Q9UN79 622 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 SLC27A5Q9Y2P5 690 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 PPP2R3BQ9Y5P8 575 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 ADAMTSL1Q8N6G6 1762 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 GLRA3O75311 464 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 SH3BGRLO75368 114 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 C22orf31O95567 290 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 PRKCGP05129 697 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 C2P06681 752 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 SMIM10L2AP0DMW4 78 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 SMIM10L2BP0DMW5 78 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 SMPD1P17405 629 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 CYP3A5P20815 502 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 CLCNKBP51801 687 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 STX1BP61266 288 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 TMED1Q13445 227 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 OLFML2BQ68BL8 750 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 KIAA1841Q6NSI8 718 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 PACS1Q6VY07 963 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 ZNF567Q8N184 647 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 IFT43Q96FT9 208 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 RPRD1AQ96P16 312 aaPredicted RBP8.4□□□□□ -1.06
HPS4-201ENST00000336873 NMRAL1Q9HBL8 299 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 SMPD4Q9NXE4 827 aa8.4□□□□□ -1.06
HPS4-201ENST00000336873 A0A0A0MRY4 1105 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 CAPN8A6NHC0 703 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 TYROBPO43914 113 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 ABHD2P08910 425 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 CCR1P32246 355 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 MPP1Q00013 466 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 AGKQ53H12 422 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 FSCBQ5H9T9 825 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 SLC30A9Q6PML9 568 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 LCLAT1Q6UWP7 414 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 CIR1Q86X95 450 aaPredicted RBP8.4□□□□□ -1.07
HPS4-201ENST00000336873 PLD6Q8N2A8 252 aaKnown RBP8.4□□□□□ -1.07
HPS4-201ENST00000336873 PHTF2Q8N3S3 785 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 PQLC3Q8N755 202 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 MTMR14Q8NCE2 650 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 CMASQ8NFW8 434 aaPredicted RBP8.4□□□□□ -1.07
HPS4-201ENST00000336873 MIPOL1Q8TD10 442 aa8.4□□□□□ -1.07
HPS4-201ENST00000336873 SLC7A6OSQ96CW6 309 aaPredicted RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms