RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 INCA1Q0VD86 236 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 TPSAB1Q15661 275 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 HSP90AA5PQ58FG0 334 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 ZNF484Q5JVG2 852 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 MARK2Q7KZI7 788 aaKnown RBP16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 HPS6Q86YV9 775 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 ST13P4Q8IZP2 240 aaPredicted RBP16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 APBB2Q92870 758 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 DCPSQ96C86 337 aaKnown RBP16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 CMTM5Q96DZ9 223 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 SPON1Q9HCB6 807 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 WDR37Q9Y2I8 494 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 ARID2Q68CP9 1835 aa16.9■□□□□ 0.3
CDC42EP4-201ENST00000335793 RNASEH1O60930 286 aaKnown RBP16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 SLC25A27O95847 323 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 C1QAP02745 245 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 TPH1P17752 444 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 CNTFP26441 200 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 FDFT1P37268 417 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 SMYD1Q8NB12 490 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 SLC4A5Q9BY07 1137 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 BFARQ9NZS9 450 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 PHIPQ8WWQ0 1821 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 H3BRB1 525 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 ATP6V1B1P15313 513 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 MSX2P35548 267 aaPredicted RBP16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 MTTPP55157 894 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 ADIGQ0VDE8 80 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 MED21Q13503 144 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 UNKQ9C0B0 810 aaKnown RBP16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 FIS1Q9Y3D6 152 aa16.89■□□□□ 0.29
CDC42EP4-201ENST00000335793 TSPAN1O60635 241 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 ACAT1P24752 427 aaKnown RBP16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 GLRBP48167 497 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 BST2Q10589 180 aaKnown RBP16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 DLG2Q15700 870 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 DPYSL2Q16555 572 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 NCBP2-AS2Q69YL0 99 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 RNF148Q8N7C7 305 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 KHSRPQ92945 711 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 RTP4Q96DX8 246 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 ZMAT2Q96NC0 199 aaKnown RBP16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 SNNO75324 88 aaPredicted RBP16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 FKBP6O75344 327 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 FGF3P11487 239 aaPredicted RBP16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 ABCE1P61221 599 aaKnown RBP16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 CDC16Q13042 620 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 SEMA5AQ13591 1074 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 MMEL1Q495T6 779 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 MBLAC2Q68D91 279 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 TP53INP2Q8IXH6 220 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 SIX6OS1Q8N1H7 587 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 CATSPER2Q96P56 530 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 QKIQ96PU8 341 aaKnown RBP eCLIP16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 GOLGA2P5Q9HBQ8 144 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 MOCS1Q9NZB8 636 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 GPRC5DQ9NZD1 345 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 MRPL42Q9Y6G3 142 aaKnown RBP16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 PGAM1P18669 254 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 IDH3AP50213 366 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 RABGGTBP53611 331 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 BCAT1P54687 386 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 PITX1P78337 314 aaPredicted RBP16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 TBL3Q12788 808 aaKnown RBP16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 ARMCX2Q7L311 632 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 DCLK2Q8N568 766 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 OSMRQ99650 979 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 EBF3Q9H4W6 596 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 SETD4Q9NVD3 440 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 COPG2Q9UBF2 871 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 GMEB1Q9Y692 573 aa16.88■□□□□ 0.29
CDC42EP4-201ENST00000335793 EEF2KO00418 725 aaKnown RBP16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 GRK2P25098 689 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 HOXD11P31277 338 aaPredicted RBP16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 GP5P40197 560 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 ADCYAP1R1P41586 468 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 CDK7P50613 346 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 ITGA7Q13683 1181 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 ZNF618Q5T7W0 954 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 PHTF2Q8N3S3 785 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 RNF139Q8WU17 664 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 CERS2Q96G23 380 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 EIF2AQ9BY44 585 aaKnown RBP16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 SNX15Q9NRS6 342 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 TLK1Q9UKI8 766 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 SLC39A10Q9ULF5 831 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 A0A088AWK7 358 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 CLDN5O00501 218 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 SOCS7O14512 581 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 TFPTP0C1Z6 253 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 SPRP35270 261 aaPredicted RBP16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 PGGT1BP53609 377 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 PDK1Q15118 436 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 GDPD5Q8WTR4 605 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 RNF34Q969K3 372 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 AGAP2Q99490 1192 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 ARPC5LQ9BPX5 153 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 VRTNQ9H8Y1 702 aa16.87■□□□□ 0.29
CDC42EP4-201ENST00000335793 S100A14Q9HCY8 104 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms