RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 OR56A4Q8NGH8 313 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 ACTL9Q8TC94 416 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 LRRC20Q8TCA0 184 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 SLC35C2Q9NQQ7 365 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 PRKAG3Q9UGI9 489 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 SH3BP1Q9Y3L3 701 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 CDK12Q9NYV4 1490 aaPredicted RBP9.97□□□□□ -0.81
COL4A6-201ENST00000334504 CRTAMO95727 393 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 JCHAINP01591 159 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 TKTP29401 623 aaKnown RBP9.97□□□□□ -0.81
COL4A6-201ENST00000334504 IFNGR2P38484 337 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 PSME3P61289 254 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 MFSD7Q6UXD7 560 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 KYAT3Q6YP21 454 aaKnown RBP9.97□□□□□ -0.81
COL4A6-201ENST00000334504 ARHGAP36Q6ZRI8 547 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 CREG2Q8IUH2 290 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 ULK2Q8IYT8 1036 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 MTFMTQ96DP5 389 aaKnown RBP9.97□□□□□ -0.81
COL4A6-201ENST00000334504 CCDC115Q96NT0 180 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 SLC4A5Q9BY07 1137 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 XPNPEP3Q9NQH7 507 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 OGDHLQ9ULD0 1010 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 USP42Q9H9J4 1324 aaKnown RBP9.97□□□□□ -0.81
COL4A6-201ENST00000334504 GAS2O43903 313 aaKnown RBP9.97□□□□□ -0.81
COL4A6-201ENST00000334504 SEPHS1P49903 392 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 FOXO4P98177 505 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 SPESP1Q6UW49 350 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 MCFD2Q8NI22 146 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 MED8Q96G25 268 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 ELP3Q9H9T3 547 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 NMRAL1Q9HBL8 299 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 RAPGEFL1Q9UHV5 662 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 A0A0G2JLW4 131 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 MAGEB16A2A368 324 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 TCF4P15884 667 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 CDK7P50613 346 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 SPP2Q13103 211 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 PAGE2BQ5JRK9 111 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 CCSAPQ6IQ19 270 aaPredicted RBP9.97□□□□□ -0.81
COL4A6-201ENST00000334504 GALNT18Q6P9A2 607 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 OFCC1Q8IZS5 231 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 SKA1Q96BD8 255 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 SYNPO2Q9UMS6 1093 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 TAF6LQ9Y6J9 622 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 SRRM3A6NNA2 597 aaPredicted RBP9.97□□□□□ -0.81
COL4A6-201ENST00000334504 ZNF879B4DU55 563 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 C2CD2LO14523 706 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 SPTLC1O15269 473 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 KPNA6O60684 536 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 TXNP10599 105 aaKnown RBP9.97□□□□□ -0.81
COL4A6-201ENST00000334504 EIF2B5Q13144 721 aaKnown RBP9.97□□□□□ -0.81
COL4A6-201ENST00000334504 ALYREFQ86V81 257 aaKnown RBP9.97□□□□□ -0.81
COL4A6-201ENST00000334504 RAB43Q86YS6 212 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 TCF12Q99081 682 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 TLR10Q9BXR5 811 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 TRPV5Q9NQA5 729 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 DPP3Q9NY33 737 aa9.97□□□□□ -0.81
COL4A6-201ENST00000334504 ALDH1A2O94788 518 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 TNFRSF8P28908 595 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 PLK1P53350 603 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 DLG4P78352 724 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 EML3Q32P44 896 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 RNASE12Q5GAN4 147 aaKnown RBP9.96□□□□□ -0.81
COL4A6-201ENST00000334504 MILR1Q7Z6M3 343 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 OOSP2Q86WS3 158 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 POMGNT2Q8NAT1 580 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 AP3S1Q92572 193 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 VPS35Q96QK1 796 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 TARS2Q9BW92 718 aaKnown RBP9.96□□□□□ -0.81
COL4A6-201ENST00000334504 NT5MQ9NPB1 228 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 PDGFCQ9NRA1 345 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 SIK3Q9Y2K2 1263 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 MTF2Q9Y483 593 aaPredicted RBP9.96□□□□□ -0.81
COL4A6-201ENST00000334504 GPC6Q9Y625 555 aaPredicted RBP9.96□□□□□ -0.81
COL4A6-201ENST00000334504 A0A1W2PQ72 361 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 CCDC85CA6NKD9 419 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 NDUFB5O43674 189 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 NPTXRO95502 500 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 ADSLP30566 484 aaPredicted RBP9.96□□□□□ -0.81
COL4A6-201ENST00000334504 S100A3P33764 101 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 POLD2P49005 469 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 SQLEQ14534 574 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 VPS72Q15906 364 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 PRR23CQ6ZRP0 262 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 UBE2Q1Q7Z7E8 422 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 ZCCHC9Q8N567 271 aaKnown RBP9.96□□□□□ -0.81
COL4A6-201ENST00000334504 OR6J1Q8NGC5 347 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 RPRD1AQ96P16 312 aaPredicted RBP9.96□□□□□ -0.81
COL4A6-201ENST00000334504 POP1Q99575 1024 aaKnown RBP9.96□□□□□ -0.81
COL4A6-201ENST00000334504 MTMR4Q9NYA4 1195 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 SLC25A13Q9UJS0 675 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 SORCS3Q9UPU3 1222 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 PCDHA3Q9Y5H8 950 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.96□□□□□ -0.81
COL4A6-201ENST00000334504 SLC37A4O43826 429 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 ECE2O60344 883 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 EPN2O95208 641 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 CYP11B2P19099 503 aa9.96□□□□□ -0.81
COL4A6-201ENST00000334504 ZNF177Q13360 481 aaPredicted RBP9.96□□□□□ -0.81
COL4A6-201ENST00000334504 METTL6Q8TCB7 284 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms