RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 KIZQ2M2Z5 673 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 GIMAP6Q6P9H5 292 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 GHDCQ8N2G8 530 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 KDM1BQ8NB78 822 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 ERP27Q96DN0 273 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLA2Q9H6Q3 261 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 IFT52Q9Y366 437 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PCDH11XQ9BZA7 1347 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PCDH11YQ9BZA8 1340 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 EXOC1LA0A1B0GW35 172 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 TMEM120BA0PK00 339 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 C2CD2LO14523 706 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 CAPGP40121 348 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 CAPZA2P47755 286 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 OGDHQ02218 1023 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PRPSAP1Q14558 356 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 HYIQ5T013 277 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PLEKHG7Q6ZR37 379 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 DENND5BQ6ZUT9 1274 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 CYFIP2Q96F07 1278 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 TMEM70Q9BUB7 260 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLITRK2Q9H156 845 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 OSBPL2Q9H1P3 480 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PCIF1Q9H4Z3 704 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PSME2Q9UL46 239 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PCDHAC2Q9Y5I4 1007 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 NSD3Q9BZ95 1437 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 MEIS3P1A6NDR6 274 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 SMAD9O15198 467 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 BMP10O95393 424 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 SEC24AO95486 1093 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 MT-ND3P03897 115 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 HEXBP07686 556 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 NQO1P15559 274 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 RPL13AP40429 203 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC1A2P43004 574 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 GK3PQ14409 553 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 UGT3A2Q3SY77 523 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 DENND1BQ6P3S1 775 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 FRMD7Q6ZUT3 714 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 HERC6Q8IVU3 1022 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 ACBD4Q8NC06 268 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 C3orf58Q8NDZ4 430 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 OR2L5Q8NG80 312 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 EPS8L3Q8TE67 593 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 CCDC107Q8WV48 283 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 ING5Q8WYH8 240 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 RFFLQ8WZ73 363 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 WFIKKN1Q96NZ8 548 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 OR51B5Q9H339 312 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 MEMO1Q9Y316 297 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 N6AMT1Q9Y5N5 214 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 SEC14L6B5MCN3 397 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 RASA4BC9J798 803 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 DEDDO75618 318 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 ME2P23368 584 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 RPL26P61254 145 aaKnown RBP6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 KANK2Q63ZY3 851 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 BAIAP2L2Q6UXY1 529 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PHTF2Q8N3S3 785 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 CCNB1IP1Q9NPC3 277 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLCO1B3Q9NPD5 702 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 BABAM1Q9NWV8 329 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 SPANXCQ9NY87 97 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 PLK2Q9NYY3 685 aa6.17□□□□□ -1.42
CDC42BPA-201ENST00000334218 TSPOAP1O95153 1857 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 FLT4P35916 1363 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 GDF11O95390 407 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 TPI1P60174 286 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 NKX6-1P78426 367 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 UBE2R2Q712K3 238 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 SSX6Q7RTT6 188 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 KBTBD3Q8NAB2 608 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 MAF1Q9H063 256 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 TAF1DQ9H5J8 278 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 SMURF2Q9HAU4 748 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 NCOA3Q9Y6Q9 1424 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 A0A1B0GVC2 190 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 PQBP1O60828 265 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 CASRP41180 1078 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 ADCY7P51828 1080 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 SNX20Q7Z614 316 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 TCEANCQ8N8B7 351 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC9A7Q96T83 725 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 ELAC2Q9BQ52 826 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 LLPHQ9BRT6 129 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 PHF20Q9BVI0 1012 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 SEZ6LQ9BYH1 1024 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 POLR1BQ9H9Y6 1135 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 MYL12BO14950 172 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 GNPATO15228 680 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 BANF1O75531 89 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 DDAH1O94760 285 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC34A2O95436 690 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC26A3P40879 764 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 TKTL1P51854 596 aa6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 SKIV2LQ15477 1246 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZIK1Q3SY52 487 aaPredicted RBP6.16□□□□□ -1.42
CDC42BPA-201ENST00000334218 C4orf22Q6V702 233 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms