RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 MON1AQ86VX9 555 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 PHF13Q86YI8 300 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-201ENST00000334136 CRYBG2Q8N1P7 616 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 EIF1ADQ8N9N8 165 aaKnown RBP12.08□□□□□ -0.48
HDAC6-201ENST00000334136 SCG3Q8WXD2 468 aaKnown RBP12.08□□□□□ -0.48
HDAC6-201ENST00000334136 FUBP3Q96I24 572 aaKnown RBP eCLIP12.08□□□□□ -0.48
HDAC6-201ENST00000334136 PAFAH2Q99487 392 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 LPIN3Q9BQK8 851 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 GPATCH2LQ9NWQ4 482 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 AFF4Q9UHB7 1163 aaKnown RBP12.08□□□□□ -0.48
HDAC6-201ENST00000334136 USP18Q9UMW8 372 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 OTOFQ9HC10 1997 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 ZNF197O14709 1029 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 UNC5CO95185 931 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 DSC3Q14574 896 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 RASA2Q15283 850 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 HEATR6Q6AI08 1181 aaKnown RBP12.08□□□□□ -0.48
HDAC6-201ENST00000334136 SAMD11Q96NU1 681 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 TWNKQ96RR1 684 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 TMEM120AQ9BXJ8 343 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 B3GNT5Q9BYG0 378 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 XYLT2Q9H1B5 865 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 SIGLEC16A6NMB1 481 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 CA3P07451 260 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 SNRPAP09012 282 aaKnown RBP12.08□□□□□ -0.48
HDAC6-201ENST00000334136 PECAM1P16284 738 aaPredicted RBP12.08□□□□□ -0.48
HDAC6-201ENST00000334136 SOX11P35716 441 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 AFF1P51825 1210 aaKnown RBP12.08□□□□□ -0.48
HDAC6-201ENST00000334136 AP1B1Q10567 949 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 TWF1Q12792 350 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 C1orf220Q5T0J3 134 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 TPGS2Q68CL5 300 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 CCDC33Q8N5R6 958 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 TCP10LQ8TDR4 215 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 CKAP2Q8WWK9 683 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 TMA16Q96EY4 203 aaKnown RBP12.08□□□□□ -0.48
HDAC6-201ENST00000334136 FOXP3Q9BZS1 431 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 WARS2Q9UGM6 360 aaKnown RBP12.08□□□□□ -0.48
HDAC6-201ENST00000334136 LZTS1Q9Y250 596 aa12.08□□□□□ -0.48
HDAC6-201ENST00000334136 CCL16O15467 120 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 STAU1O95793 577 aaKnown RBP12.07□□□□□ -0.48
HDAC6-201ENST00000334136 TRUB2O95900 331 aaKnown RBP12.07□□□□□ -0.48
HDAC6-201ENST00000334136 JAM2P57087 298 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 MRPS5P82675 430 aaKnown RBP12.07□□□□□ -0.48
HDAC6-201ENST00000334136 DSG1Q02413 1049 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 KPNB1Q14974 876 aaKnown RBP12.07□□□□□ -0.48
HDAC6-201ENST00000334136 PTPN20Q4JDL3 420 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 IL31Q6EBC2 164 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 OSTM1Q86WC4 334 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 DDI1Q8WTU0 396 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 CENPTQ96BT3 561 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 KCNK16Q96T55 309 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 PCDHB18PQ96TA0 734 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 BCO2Q9BYV7 579 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 AP4E1Q9UPM8 1137 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 TRIM43BA6NCK2 446 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 SPTLC1O15269 473 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 TLR5O60602 858 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 BMPR1AP36894 532 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 AQP5P55064 265 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 ARHGAP17Q68EM7 881 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 ACAD11Q709F0 780 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 LRRC6Q86X45 466 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 SCUBE1Q8IWY4 988 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 COLGALT2Q8IYK4 626 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 PHOSPHO2Q8TCD6 241 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 GANCQ8TET4 914 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 TRIM43Q96BQ3 446 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-201ENST00000334136 CPXM1Q96SM3 734 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 MUC3BQ9H195 1237 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 C10orf88Q9H8K7 445 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-201ENST00000334136 H0Y626 953 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 PYGBP11216 843 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 MMP8P22894 467 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 CHKAP35790 457 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 PTDSS1P48651 473 aaKnown RBP12.07□□□□□ -0.48
HDAC6-201ENST00000334136 CAP1Q01518 475 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 ZNF177Q13360 481 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-201ENST00000334136 CDH18Q13634 790 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 HABP4Q5JVS0 413 aaKnown RBP12.07□□□□□ -0.48
HDAC6-201ENST00000334136 ATAT1Q5SQI0 421 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 PMF1Q6P1K2 205 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 IYDQ6PHW0 289 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 RNF135Q8IUD6 432 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 SLC43A3Q8NBI5 491 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 C2orf15Q8WU43 125 aaKnown RBP12.07□□□□□ -0.48
HDAC6-201ENST00000334136 PDP2Q9P2J9 529 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 AJAP1Q9UKB5 411 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-201ENST00000334136 PCDHGC3Q9UN70 934 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 LRCH1Q9Y2L9 728 aa12.07□□□□□ -0.48
HDAC6-201ENST00000334136 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
HDAC6-201ENST00000334136 MRPL42Q9Y6G3 142 aaKnown RBP12.07□□□□□ -0.48
HDAC6-201ENST00000334136 TRAV19A0A0A6YYK7 116 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 ATP9BO43861 1147 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 SLC4A1P02730 911 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 FECHP22830 423 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 MMP13P45452 471 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 SLC5A3P53794 718 aa12.06□□□□□ -0.48
HDAC6-201ENST00000334136 ANO4Q32M45 955 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms