RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 COPZ1P61923 177 aa12.13□□□□□ -0.47
LIMK2-202ENST00000333611 ART3Q13508 389 aa12.13□□□□□ -0.47
LIMK2-202ENST00000333611 FAM214AQ32MH5 1076 aa12.13□□□□□ -0.47
LIMK2-202ENST00000333611 ADGRD1Q6QNK2 874 aa12.13□□□□□ -0.47
LIMK2-202ENST00000333611 TDRPQ86YL5 185 aa12.13□□□□□ -0.47
LIMK2-202ENST00000333611 RTKN2Q8IZC4 609 aa12.13□□□□□ -0.47
LIMK2-202ENST00000333611 SAMD3Q8N6K7 520 aa12.13□□□□□ -0.47
LIMK2-202ENST00000333611 BPIFB6Q8NFQ5 453 aa12.13□□□□□ -0.47
LIMK2-202ENST00000333611 ZNF398Q8TD17 642 aa12.13□□□□□ -0.47
LIMK2-202ENST00000333611 BBS2Q9BXC9 721 aa12.13□□□□□ -0.47
LIMK2-202ENST00000333611 VPS11Q9H270 941 aa12.13□□□□□ -0.47
LIMK2-202ENST00000333611 ST6GALNAC4Q9H4F1 302 aa12.13□□□□□ -0.47
LIMK2-202ENST00000333611 AURKCQ9UQB9 309 aa12.13□□□□□ -0.47
LIMK2-202ENST00000333611 M0QYV0 167 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 KPNA4O00629 521 aaPredicted RBP12.12□□□□□ -0.47
LIMK2-202ENST00000333611 TM9SF1O15321 606 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 ATE1O95260 518 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 MIPP30301 263 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 SERPINB1P30740 379 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 TPD52P55327 224 aaPredicted RBP12.12□□□□□ -0.47
LIMK2-202ENST00000333611 PTP4A2Q12974 167 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 DPYSL3Q14195 570 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 ARL13BQ3SXY8 428 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 AARS2Q5JTZ9 985 aaKnown RBP12.12□□□□□ -0.47
LIMK2-202ENST00000333611 FLCNQ8NFG4 579 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 FAR2Q96K12 515 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 ADPGKQ9BRR6 497 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 TOR3AQ9H497 397 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 STX16-NPEPL1H3BU86 382 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 AQP9O43315 295 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 MAN1A2O60476 641 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 GJB1P08034 283 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 KRT7P08729 469 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 ZNF12P17014 697 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 PTPN1P18031 435 aaKnown RBP12.12□□□□□ -0.47
LIMK2-202ENST00000333611 KDELR1P24390 212 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 POLR2BP30876 1174 aaKnown RBP12.12□□□□□ -0.47
LIMK2-202ENST00000333611 STIP1P31948 543 aaKnown RBP12.12□□□□□ -0.47
LIMK2-202ENST00000333611 PTGER2P43116 358 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 PFKPQ01813 784 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 GRM2Q14416 872 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 BTBD9Q96Q07 612 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 KCNK16Q96T55 309 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 PKP2Q99959 881 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 C10orf71Q711Q0 1435 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 TAF1LQ8IZX4 1826 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 SYNJ2BP-COX16A0A087WUM0 186 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 A0A0B4J269 797 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 AKAP10O43572 662 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 SNAPC2Q13487 334 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 GJC2Q5T442 439 aaPredicted RBP12.12□□□□□ -0.47
LIMK2-202ENST00000333611 CIAPIN1Q6FI81 312 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 NIPAL1Q6NVV3 410 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 ELMSAN1Q6PJG2 1045 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 KCNT2Q6UVM3 1135 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 OFCC1Q8IZS5 231 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 ZC3H15Q8WU90 426 aaKnown RBP12.12□□□□□ -0.47
LIMK2-202ENST00000333611 JADE3Q92613 823 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 CEP41Q9BYV8 373 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 ITM2CQ9NQX7 267 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 COX16Q9P0S2 106 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 SCHIP1Q9P0W5 487 aaPredicted RBP12.12□□□□□ -0.47
LIMK2-202ENST00000333611 PPP1R1BQ9UD71 204 aaPredicted RBP12.12□□□□□ -0.47
LIMK2-202ENST00000333611 SNCAIPQ9Y6H5 919 aa12.12□□□□□ -0.47
LIMK2-202ENST00000333611 APBA3O96018 575 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 EDN1P05305 212 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 RXRBP28702 533 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 SEPHS1P49903 392 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 PCSK7Q16549 785 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 MTX3Q5HYI7 312 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 KIAA0319LQ8IZA0 1049 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 UNC5BQ8IZJ1 945 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 AHI1Q8N157 1196 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 NAT8LQ8N9F0 302 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 SLC35B2Q8TB61 432 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 DEPDC1BQ8WUY9 529 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 NKD2Q969F2 451 aaPredicted RBP12.11□□□□□ -0.47
LIMK2-202ENST00000333611 AKT1S1Q96B36 256 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 ALKBH8Q96BT7 664 aaKnown RBP12.11□□□□□ -0.47
LIMK2-202ENST00000333611 HEXIM2Q96MH2 286 aaKnown RBP12.11□□□□□ -0.47
LIMK2-202ENST00000333611 CGRRF1Q99675 332 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 C17orf75Q9HAS0 396 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 ZNF302Q9NR11 478 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 UCKL1Q9NWZ5 548 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 DNAJC28Q9NX36 388 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 DRG1Q9Y295 367 aaKnown RBP12.11□□□□□ -0.47
LIMK2-202ENST00000333611 SPEF1Q9Y4P9 236 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 CORINQ9Y5Q5 1042 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 V9GYQ6 96 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 STRCQ7RTU9 1775 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 NRAPQ86VF7 1730 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 LYPLA2O95372 231 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 CHRNB1P11230 501 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 CKMT2P17540 419 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 SAT1P21673 171 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 HNRNPDQ14103 355 aaKnown RBP12.11□□□□□ -0.47
LIMK2-202ENST00000333611 TRIM25Q14258 630 aaKnown RBP12.11□□□□□ -0.47
LIMK2-202ENST00000333611 ZNF829Q3KNS6 432 aaPredicted RBP12.11□□□□□ -0.47
LIMK2-202ENST00000333611 WDR78Q5VTH9 848 aa12.11□□□□□ -0.47
LIMK2-202ENST00000333611 PDPK2PQ6A1A2 396 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms