RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 CKAP2Q8WWK9 683 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 ATXN2LQ8WWM7 1075 aaKnown RBP9.72□□□□□ -0.85
SS18L1-201ENST00000331758 ACBD6Q9BR61 282 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 SCUBE2Q9NQ36 999 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 ZDHHC18Q9NUE0 388 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 DGKIO75912 1065 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 WARSP23381 471 aaKnown RBP9.72□□□□□ -0.85
SS18L1-201ENST00000331758 MMP13P45452 471 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 ST8SIA6P61647 398 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 RBBP7Q16576 425 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 IMPG1Q17R60 797 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 CTU1Q7Z7A3 348 aaKnown RBP9.72□□□□□ -0.85
SS18L1-201ENST00000331758 TRABD2AQ86V40 505 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 CRYBG2Q8N1P7 616 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 AGGF1Q8N302 714 aaeCLIP9.72□□□□□ -0.85
SS18L1-201ENST00000331758 LPCAT1Q8NF37 534 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 CMASQ8NFW8 434 aaPredicted RBP9.72□□□□□ -0.85
SS18L1-201ENST00000331758 MS4A4AQ96JQ5 239 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 GBP5Q96PP8 586 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 SLC4A5Q9BY07 1137 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 EML4Q9HC35 981 aaKnown RBP9.72□□□□□ -0.85
SS18L1-201ENST00000331758 NVLO15381 856 aaKnown RBP9.72□□□□□ -0.85
SS18L1-201ENST00000331758 FGF10O15520 208 aaPredicted RBP9.72□□□□□ -0.85
SS18L1-201ENST00000331758 SRP72O76094 671 aaKnown RBP9.72□□□□□ -0.85
SS18L1-201ENST00000331758 LRIG2O94898 1065 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 CREB1P16220 341 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 KLRC2P26717 231 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 XRCC4Q13426 336 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 SPANXN3Q5MJ09 141 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 AGAP9Q5VTM2 703 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 CLEC20AQ6ZU45 233 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 TMEM110Q86TL2 294 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 TMA16Q96EY4 203 aaKnown RBP9.72□□□□□ -0.85
SS18L1-201ENST00000331758 CERS2Q96G23 380 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 DCUN1D1Q96GG9 259 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 NSL1Q96IY1 281 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 PIWIL1Q96J94 861 aaKnown RBP9.72□□□□□ -0.85
SS18L1-201ENST00000331758 PTPN18Q99952 460 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 TBL1YQ9BQ87 522 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 TMEM120AQ9BXJ8 343 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 KDM4CQ9H3R0 1056 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 CNTN3Q9P232 1028 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 STOML1Q9UBI4 398 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 SRRDQ9UH36 339 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 ANGPTL2Q9UKU9 493 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 Q9Y3F1 56 aa9.72□□□□□ -0.85
SS18L1-201ENST00000331758 PIRTP0C851 137 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 ATXN8OSP0DMR3 200 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 CD151P48509 253 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 ATXN3P54252 364 aaPredicted RBP9.71□□□□□ -0.85
SS18L1-201ENST00000331758 HDAC4P56524 1084 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 ARHGEF7Q14155 803 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 HIC1Q14526 733 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 RGS9BPQ6ZS82 235 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 TMEM40Q8WWA1 233 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 SCLYQ96I15 445 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 EXOC2Q96KP1 924 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 ZNF558Q96NG5 402 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 KLHL5Q96PQ7 755 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 IL1RAPL1Q9NZN1 696 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 CD274Q9NZQ7 290 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 CRLS1Q9UJA2 301 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 COL5A3P25940 1745 aaPredicted RBP9.71□□□□□ -0.85
SS18L1-201ENST00000331758 UBR3Q6ZT12 1888 aa9.71□□□□□ -0.85
SS18L1-201ENST00000331758 MAP3K7O43318 606 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 GLP2RO95838 553 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 PTPN7P35236 360 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 CD86P42081 329 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 USP41Q3LFD5 358 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 HECTD3Q5T447 861 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 TAC4Q86UU9 113 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 OSTM1Q86WC4 334 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 DENND1CQ8IV53 801 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 NIPA2Q8N8Q9 360 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 SLC35B2Q8TB61 432 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 SLC35F5Q8WV83 523 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 RSPH1Q8WYR4 309 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 TRIB2Q92519 343 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 B3GALT6Q96L58 329 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 TTPALQ9BTX7 342 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 APOL5Q9BWW9 433 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 TRIM54Q9BYV2 358 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 ZYG11BQ9C0D3 744 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 FAM124BQ9H5Z6 455 aaPredicted RBP9.71□□□□□ -0.86
SS18L1-201ENST00000331758 GMIPQ9P107 970 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 ERI2A8K979 691 aaKnown RBP9.71□□□□□ -0.86
SS18L1-201ENST00000331758 F8W8V4 182 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 KIF3CO14782 793 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 SNX3O60493 162 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 SOAT2O75908 522 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 MT-CO1P00395 513 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 HADHAP40939 763 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 MAP7Q14244 749 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 CFAP52Q8N1V2 620 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 WDTC1Q8N5D0 677 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 CD101Q93033 1021 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 EFHD1Q9BUP0 239 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 IL22Q9GZX6 179 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 SYBUQ9NX95 663 aa9.71□□□□□ -0.86
SS18L1-201ENST00000331758 UTP6Q9NYH9 597 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms