RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 PCDHA3Q9Y5H8 950 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 OR51B4Q9Y5P0 310 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 A0A0C4DFX4 3053 aa16.49■□□□□ 0.23
LRRC28-202ENST00000331450 CCDC66A2RUB6 948 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 DCLK1O15075 740 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 FTCDO95954 541 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 KRT1P04264 644 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 ERCC2P18074 760 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 MZF1P28698 734 aaPredicted RBP16.48■□□□□ 0.23
LRRC28-202ENST00000331450 OR1E1P30953 314 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 CSKP41240 450 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 TNFRSF4P43489 277 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 PEX5P50542 639 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 OXCT1P55809 520 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 MMRN1Q13201 1228 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 KRT81Q14533 505 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 DMC1Q14565 340 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 EIF4HQ15056 248 aaKnown RBP16.48■□□□□ 0.23
LRRC28-202ENST00000331450 TAZQ16635 292 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 PLEKHG6Q3KR16 790 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 DGKKQ5KSL6 1271 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 C6orf118Q5T5N4 469 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 ZNF783Q6ZMS7 281 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 PEX26Q7Z412 305 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 CCDC117Q8IWD4 279 aaPredicted RBP16.48■□□□□ 0.23
LRRC28-202ENST00000331450 UMODL1-AS1Q8N2C9 162 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 KCTD6Q8NC69 237 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 CLDN23Q96B33 292 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 HES6Q96HZ4 224 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 NOL6Q9H6R4 1146 aaKnown RBP16.48■□□□□ 0.23
LRRC28-202ENST00000331450 KCND1Q9NSA2 647 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 RBM12Q9NTZ6 932 aaKnown RBP16.48■□□□□ 0.23
LRRC28-202ENST00000331450 AMFRQ9UKV5 643 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 HCN2Q9UL51 889 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 STARD13Q9Y3M8 1113 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 CKAP5Q14008 2032 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 NUP205Q92621 2012 aa16.48■□□□□ 0.23
LRRC28-202ENST00000331450 ILVBLA1L0T0 632 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 LRRD1A4D1F6 860 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 ANTXRLA6NF34 631 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 FAM170BA6NMN3 283 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 MIF4GDA9UHW6 222 aaKnown RBP16.47■□□□□ 0.23
LRRC28-202ENST00000331450 RHOCP08134 193 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 TNNT1P13805 278 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 AOC1P19801 751 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 KIR2DL1P43626 348 aaPredicted RBP16.47■□□□□ 0.23
LRRC28-202ENST00000331450 FBXO43Q4G163 708 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 PITRM1Q5JRX3 1037 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 MAP7D3Q8IWC1 876 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 APCDD1Q8J025 514 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 NPWQ8N729 165 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 TRIM58Q8NG06 486 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 PCDH19Q8TAB3 1148 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 UBE2Q2Q8WVN8 375 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 ALG3Q92685 438 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 FEM1AQ9BSK4 669 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 CALN1Q9BXU9 219 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 MFSD1Q9H3U5 465 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 TRMT1Q9NXH9 659 aaKnown RBP16.47■□□□□ 0.23
LRRC28-202ENST00000331450 DLGAP2Q9P1A6 1054 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 DNAI1Q9UI46 699 aa16.47■□□□□ 0.23
LRRC28-202ENST00000331450 PACSIN2Q9UNF0 486 aaPredicted RBP16.47■□□□□ 0.23
LRRC28-202ENST00000331450 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.47■□□□□ 0.23
LRRC28-202ENST00000331450 A0A0D9SEW6 157 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 TBC1D3BA6NDS4 549 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 DDX3YO15523 660 aaKnown RBP16.46■□□□□ 0.23
LRRC28-202ENST00000331450 AMPD1P23109 780 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 RPS9P46781 194 aaKnown RBP16.46■□□□□ 0.23
LRRC28-202ENST00000331450 GNA12Q03113 381 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 LRRC32Q14392 662 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 ANKRD20A8PQ5CZ79 823 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 MEI1Q5TIA1 1274 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 RNF219Q5W0B1 726 aaPredicted RBP16.46■□□□□ 0.23
LRRC28-202ENST00000331450 AFMIDQ63HM1 303 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 MBLAC2Q68D91 279 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 MFSD7Q6UXD7 560 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 NUDT18Q6ZVK8 323 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 SYNPOQ8N3V7 929 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 DCAF4L2Q8NA75 395 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 FLCNQ8NFG4 579 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 EXD1Q8NHP7 514 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 TTC17Q96AE7 1141 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 ALS2CR12Q96Q35 445 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 PSMB7Q99436 277 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 ETNK2Q9NVF9 386 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 ELOVL2Q9NXB9 296 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 SIT1Q9Y3P8 196 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 MFHAS1Q9Y4C4 1052 aa16.46■□□□□ 0.23
LRRC28-202ENST00000331450 ATG2BQ96BY7 2078 aa16.46■□□□□ 0.22
LRRC28-202ENST00000331450 GOLGA6L9A6NEM1 432 aa16.45■□□□□ 0.22
LRRC28-202ENST00000331450 DAPK3O43293 454 aa16.45■□□□□ 0.22
LRRC28-202ENST00000331450 PI15O43692 258 aa16.45■□□□□ 0.22
LRRC28-202ENST00000331450 RAMP2O60895 175 aa16.45■□□□□ 0.22
LRRC28-202ENST00000331450 RNF40O75150 1001 aa16.45■□□□□ 0.22
LRRC28-202ENST00000331450 HNRNPLP14866 589 aaKnown RBP eCLIP16.45■□□□□ 0.221e-7■■■□□ 14.9
LRRC28-202ENST00000331450 CDKN2BP42772 138 aa16.45■□□□□ 0.22
LRRC28-202ENST00000331450 CLCN5P51795 746 aa16.45■□□□□ 0.22
LRRC28-202ENST00000331450 NDST2P52849 883 aa16.45■□□□□ 0.22
LRRC28-202ENST00000331450 YBEYP58557 167 aaPredicted RBP16.45■□□□□ 0.22
LRRC28-202ENST00000331450 ZFYVE27Q5T4F4 411 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms