RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 DCXO43602 365 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 SNX3O60493 162 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 SPATA31C1P0DKV0 1188 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 MMP13P45452 471 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 ERAP2Q6P179 960 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 ATG16L2Q8NAA4 619 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 UTP6Q9NYH9 597 aaKnown RBP11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 hCG_1818297A0A087WSY0 165 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 FGRP09769 529 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 NOS2P35228 1153 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 TNFSF9P41273 254 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 ADCYAP1R1P41586 468 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 RXRGP48443 463 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 AMPD2Q01433 879 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 PWP1Q13610 501 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 IRGCQ6NXR0 463 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 IRF2BP2Q7Z5L9 587 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 UGT2B28Q9BY64 529 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 ULBP1Q9BZM6 244 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 IL22Q9GZX6 179 aa11.11□□□□□ -0.63
SNRNP200-201ENST00000323853 FAM237BA0A1B0GVD1 139 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 ZNF7P17097 686 aaPredicted RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 PTPRAP18433 802 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 DRD4P21917 467 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 RPL22P35268 128 aaKnown RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 MARCKSL1P49006 195 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 SERPINH1P50454 418 aaKnown RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 OR52K1Q8NGK4 314 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 ZSCAN18Q8TBC5 510 aaPredicted RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 KCNK1O00180 336 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 BTN3A1O00481 513 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 RGS14O43566 566 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 PTPN1P18031 435 aaKnown RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 DDR1Q08345 913 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 MILR1Q7Z6M3 343 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 TMEM132CQ8N3T6 1108 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 PRELID2Q8N945 189 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 WNT8BQ93098 351 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 SEMA6AQ9H2E6 1030 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 PARVBQ9HBI1 364 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 STARD7Q9NQZ5 370 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 TMCO1Q9UM00 188 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 MYRFQ9Y2G1 1151 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 REXO2Q9Y3B8 237 aaKnown RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 AFDNP55196 1824 aaKnown RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 PEX1O43933 1283 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 SEC22BO75396 215 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 RAD23AP54725 363 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 DDR2Q16832 855 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 PLEKHA7Q6IQ23 1121 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 UCMAQ8WVF2 138 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 ADM5C9JUS6 153 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 OPLAHO14841 1288 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 CYP1A1P04798 512 aaPredicted RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 OR56A5P0C7T3 313 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 BDNFP23560 247 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 SLC44A4Q53GD3 710 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 MBOAT7Q96N66 472 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 SLC25A23Q9BV35 468 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 MTFR1LQ9H019 292 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 RPS6KB2Q9UBS0 482 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 LNPEPQ9UIQ6 1025 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 ZMYM5Q9UJ78 669 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 DCDC2CA8MYV0 355 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 PROCP04070 461 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 HOXA10P31260 410 aaPredicted RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 PSMD7P51665 324 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 UROC1Q96N76 676 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 C9orf16Q9BUW7 83 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 C6orf203Q9P0P8 240 aaPredicted RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 FZD1Q9UP38 647 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 SPTLC1O15269 473 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 INPP4BO15327 924 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 DDX3YO15523 660 aaKnown RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 RGS5O15539 181 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 CNOT3O75175 753 aaKnown RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 PIGNO95427 931 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 LTA4HP09960 611 aaKnown RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 POU1F1P28069 291 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 GRK3P35626 688 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 FRG1Q14331 258 aaKnown RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 SQLEQ14534 574 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 SAMD4BQ5PRF9 694 aaKnown RBP11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 ARHGAP17Q68EM7 881 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 SVOPQ8N4V2 548 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 DLG3Q92796 817 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 HGH1Q9BTY7 390 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 SORCS3Q9UPU3 1222 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 SNX8Q9Y5X2 465 aa11.1□□□□□ -0.63
SNRNP200-201ENST00000323853 IFT172Q9UG01 1749 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 RECQL4O94761 1208 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 LDLRP01130 860 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 DRG2P55039 364 aaKnown RBP11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 RPS7P62081 194 aaKnown RBP11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 NOMO3P69849 1222 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 FAM171A1Q5VUB5 890 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 FAM45BPQ6NSW5 357 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 VSIG10LQ86VR7 867 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 SPATA20Q8TB22 786 aa11.09□□□□□ -0.63
SNRNP200-201ENST00000323853 ZNF184Q99676 751 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms