RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 SLC22A12Q96S37 553 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 RXFP1Q9HBX9 757 aa18.88■□□□□ 0.61
USP39-201ENST00000323701 C5orf42Q9H799 3197 aa18.87■□□□□ 0.61
USP39-201ENST00000323701 SLC6A4P31645 630 aa18.87■□□□□ 0.61
USP39-201ENST00000323701 HNRNPH2P55795 449 aaKnown RBP18.87■□□□□ 0.61
USP39-201ENST00000323701 CRADDP78560 199 aa18.87■□□□□ 0.61
USP39-201ENST00000323701 GUCY1A3Q02108 690 aa18.87■□□□□ 0.61
USP39-201ENST00000323701 HECTD3Q5T447 861 aa18.87■□□□□ 0.61
USP39-201ENST00000323701 SIGLEC10Q96LC7 697 aa18.87■□□□□ 0.61
USP39-201ENST00000323701 CYP2S1Q96SQ9 504 aa18.87■□□□□ 0.61
USP39-201ENST00000323701 PSD3Q9NYI0 1048 aa18.87■□□□□ 0.61
USP39-201ENST00000323701 FNIP2Q9P278 1114 aa18.87■□□□□ 0.61
USP39-201ENST00000323701 IGSF9Q9P2J2 1179 aa18.87■□□□□ 0.61
USP39-201ENST00000323701 EXOC1LA0A1B0GW35 172 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 POC1B-GALNT4F8VUJ3 575 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 STK10O94804 968 aaKnown RBP18.86■□□□□ 0.61
USP39-201ENST00000323701 HTR7P34969 479 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 PAPOLAP51003 745 aaKnown RBP18.86■□□□□ 0.61
USP39-201ENST00000323701 STAT4Q14765 748 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 PARP6Q2NL67 630 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 TEX44Q53QW1 395 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 FAM133BQ5BKY9 247 aaKnown RBP18.86■□□□□ 0.61
USP39-201ENST00000323701 OTOP3Q7RTS5 596 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 FBF1Q8TES7 1133 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 TRMT2BQ96GJ1 504 aaKnown RBP18.86■□□□□ 0.61
USP39-201ENST00000323701 MLPHQ9BV36 600 aaPredicted RBP18.86■□□□□ 0.61
USP39-201ENST00000323701 SLC12A6Q9UHW9 1150 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 DOCK6Q96HP0 2047 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.86■□□□□ 0.61
USP39-201ENST00000323701 HIDE1A8MVS5 230 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 SCAMP3O14828 347 aaKnown RBP18.86■□□□□ 0.61
USP39-201ENST00000323701 USP12O75317 370 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 CXCL14O95715 111 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 MYOGP15173 224 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 NFKB1P19838 968 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 ELF1P32519 619 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 FDFT1P37268 417 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 SKOR1P84550 965 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 EXOC3L1Q86VI1 746 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 PALM2Q8IXS6 379 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 CFAP52Q8N1V2 620 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 ZNF276Q8N554 614 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 ATPAF2Q8N5M1 289 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 ATP11CQ8NB49 1132 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 MDM1Q8TC05 714 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 OVCA2Q8WZ82 227 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 TEKT5Q96M29 485 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 RAD9AQ99638 391 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 ZYG11BQ9C0D3 744 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 BRD8Q9H0E9 1235 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 IL21Q9HBE4 155 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 TRPM5Q9NZQ8 1165 aa18.86■□□□□ 0.61
USP39-201ENST00000323701 WASH4PA8MWX3 477 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 TRDMT1O14717 391 aaKnown RBP18.85■□□□□ 0.61
USP39-201ENST00000323701 OAS1P00973 400 aaKnown RBP18.85■□□□□ 0.61
USP39-201ENST00000323701 ATP2A2P16615 1042 aaKnown RBP18.85■□□□□ 0.61
USP39-201ENST00000323701 CBLBQ13191 982 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 TAF12Q16514 161 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 PPP1R21Q6ZMI0 780 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 TMC7Q7Z402 723 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 PRPF39Q86UA1 669 aaKnown RBP18.85■□□□□ 0.61
USP39-201ENST00000323701 PDZD8Q8NEN9 1154 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 SP7Q8TDD2 431 aaPredicted RBP18.85■□□□□ 0.61
USP39-201ENST00000323701 PSMG2Q969U7 264 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 CFAP36Q96G28 342 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 RPRD1AQ96P16 312 aaPredicted RBP18.85■□□□□ 0.61
USP39-201ENST00000323701 TSGA13Q96PP4 275 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 XPO6Q96QU8 1125 aaKnown RBP18.85■□□□□ 0.61
USP39-201ENST00000323701 NACA2Q9H009 215 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 UBP1Q9NZI7 540 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 PPARGC1AQ9UBK2 798 aaKnown RBP18.85■□□□□ 0.61
USP39-201ENST00000323701 SLC4A7Q9Y6M7 1214 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 TCRBV9S1A1TA0A576 114 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 DRGXA6NNA5 263 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 TLL1O43897 1013 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 AGTP01019 485 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 C1QAP02745 245 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 CCNB1P14635 433 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 RHOQP17081 205 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 ZXDBP98169 803 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 LILRA6Q6PI73 481 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 CHSY1Q86X52 802 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 DENND1CQ8IV53 801 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 HERVK_113Q902F9 699 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 HMCESQ96FZ2 354 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 TMEM248Q9NWD8 314 aa18.85■□□□□ 0.61
USP39-201ENST00000323701 HBS1LQ9Y450 684 aaKnown RBP18.85■□□□□ 0.61
USP39-201ENST00000323701 STC2O76061 302 aa18.84■□□□□ 0.61
USP39-201ENST00000323701 IRF1P10914 325 aa18.84■□□□□ 0.61
USP39-201ENST00000323701 TACR2P21452 398 aa18.84■□□□□ 0.61
USP39-201ENST00000323701 CCNCP24863 283 aa18.84■□□□□ 0.61
USP39-201ENST00000323701 SGSHP51688 502 aa18.84■□□□□ 0.61
USP39-201ENST00000323701 PPP2R2AP63151 447 aa18.84■□□□□ 0.61
USP39-201ENST00000323701 NUGGCQ68CJ6 796 aa18.84■□□□□ 0.61
USP39-201ENST00000323701 PSRC1Q6PGN9 363 aaPredicted RBP18.84■□□□□ 0.61
USP39-201ENST00000323701 LRRC31Q6UY01 552 aa18.84■□□□□ 0.61
USP39-201ENST00000323701 UMODL1-AS1Q8N2C9 162 aa18.84■□□□□ 0.61
USP39-201ENST00000323701 LZTR1Q8N653 840 aa18.84■□□□□ 0.61
USP39-201ENST00000323701 MAML1Q92585 1016 aa18.84■□□□□ 0.61
USP39-201ENST00000323701 OXNAD1Q96HP4 312 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms