RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 DNASE1L3Q13609 305 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 FAM182BQ5T319 152 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 TMEM198Q66K66 360 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 NPNTQ6UXI9 565 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 NAPRTQ6XQN6 538 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 FRA10AC1Q70Z53 315 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 UNC5BQ8IZJ1 945 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 MPP5Q8N3R9 675 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 LSM14AQ8ND56 463 aaKnown RBP8.12□□□□□ -1.11
RTL3-201ENST00000321110 CAPSLQ8WWF8 208 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 TMA16Q96EY4 203 aaKnown RBP8.12□□□□□ -1.11
RTL3-201ENST00000321110 UHRF1Q96T88 793 aaPredicted RBP8.12□□□□□ -1.11
RTL3-201ENST00000321110 CSF3RQ99062 836 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 NPAS2Q99743 824 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 CDCA7Q9BWT1 371 aaPredicted RBP8.12□□□□□ -1.11
RTL3-201ENST00000321110 VRTNQ9H8Y1 702 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 RAB6BQ9NRW1 208 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 C20orf96Q9NUD7 363 aaPredicted RBP8.12□□□□□ -1.11
RTL3-201ENST00000321110 RBAKQ9NYW8 714 aaPredicted RBP8.12□□□□□ -1.11
RTL3-201ENST00000321110 TMEM216Q9P0N5 145 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 TMEM9Q9P0T7 183 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 COPG2Q9UBF2 871 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 SFMBT1Q9UHJ3 866 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 CNOT6Q9ULM6 557 aaKnown RBP8.12□□□□□ -1.11
RTL3-201ENST00000321110 TCAF1Q9Y4C2 921 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 PCDHB12Q9Y5F1 795 aa8.12□□□□□ -1.11
RTL3-201ENST00000321110 NRAPQ86VF7 1730 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 RBBP6Q7Z6E9 1792 aaKnown RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 SPDYE2BA6NHP3 402 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 TRIM38O00635 465 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 CHADO15335 359 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 GAS7O60861 476 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 GMNNO75496 209 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 SPDYE6P0CI01 402 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 NR4A2P43354 598 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 NLRP11P59045 1033 aaKnown RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 SLC25A11Q02978 314 aaKnown RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 TRPC3Q13507 836 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 TAZQ16635 292 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 SPDYE2Q495Y8 402 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 PPM1JQ5JR12 505 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 SLC10A5Q5PT55 438 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 DNAJC24Q6P3W2 148 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 RSBN1LQ6PCB5 846 aaPredicted RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 DCUN1D2Q6PH85 259 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 TMEM270Q6UE05 265 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 ELMOD1Q8N336 334 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 PDZD8Q8NEN9 1154 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 ABHD11Q8NFV4 315 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 SPATA18Q8TC71 538 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 ZNF516Q92618 1163 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 ASB9Q96DX5 294 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 SH3YL1Q96HL8 342 aaPredicted RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 FEM1CQ96JP0 617 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 MAELQ96JY0 434 aaKnown RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 ZNF347Q96SE7 839 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 SH3GL1Q99961 368 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 MTG1Q9BT17 334 aaPredicted RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 FRMD8P1Q9BZ68 369 aaPredicted RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 ZNF385DQ9H6B1 395 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.11□□□□□ -1.11
RTL3-201ENST00000321110 ZNF358Q9NW07 568 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 QPCTLQ9NXS2 382 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 SEPT3Q9UH03 358 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 ATP11BQ9Y2G3 1177 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 E2F8A0AVK6 867 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 SAC3D1A6NKF1 404 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 TIPRLO75663 272 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 ITGBL1O95965 494 aaPredicted RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 FOSP01100 380 aaPredicted RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 ENO2P09104 434 aaPredicted RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 MAPTP10636 758 aaKnown RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 KDELR1P24390 212 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 PTPN9P43378 593 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 YAP1P46937 504 aaKnown RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 SERPINB9P50453 376 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 CYP24A1Q07973 514 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 CBLBQ13191 982 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 PICALMQ13492 652 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 ART3Q13508 389 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 TRIM25Q14258 630 aaKnown RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 PTK2BQ14289 1009 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 DGKDQ16760 1214 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 ZNF280DQ6N043 979 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 CYP2R1Q6VVX0 501 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 RFX6Q8HWS3 928 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 CLIP4Q8N3C7 705 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 CBR4Q8N4T8 237 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 OR7G1Q8NGA0 311 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 OR13F1Q8NGS4 319 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 DEPDC1BQ8WUY9 529 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 MOCOSQ96EN8 888 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 FBXL20Q96IG2 436 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 MARK4Q96L34 752 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 MFSD14AQ96MC6 490 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 GPR101Q96P66 508 aaPredicted RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 ADI1Q9BV57 179 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 HOXD1Q9GZZ0 328 aa8.11□□□□□ -1.11
RTL3-201ENST00000321110 TP63Q9H3D4 680 aaPredicted RBP8.11□□□□□ -1.11
RTL3-201ENST00000321110 ADA2Q9NZK5 511 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms