RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 RAB3IL1Q8TBN0 382 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 ACMSDQ8TDX5 336 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 RNF34Q969K3 372 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 CRTAC1Q9NQ79 661 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 RCOR3Q9P2K3 495 aaPredicted RBP17.82■□□□□ 0.44
COL9A1-201ENST00000320755 PLA2G4CQ9UP65 541 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 DOCK3Q8IZD9 2030 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 MAP3K7O43318 606 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 GARSP41250 739 aaKnown RBP17.82■□□□□ 0.44
COL9A1-201ENST00000320755 IDH3AP50213 366 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 OLFML2BQ68BL8 750 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 USP50Q70EL3 339 aaPredicted RBP17.82■□□□□ 0.44
COL9A1-201ENST00000320755 CYS1Q717R9 158 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 PSTKQ8IV42 348 aaKnown RBP17.82■□□□□ 0.44
COL9A1-201ENST00000320755 LPPQ93052 612 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 SENP8Q96LD8 212 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 ANKRD27Q96NW4 1050 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 SORT1Q99523 831 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 C20orf96Q9NUD7 363 aaPredicted RBP17.82■□□□□ 0.44
COL9A1-201ENST00000320755 DLGAP2Q9P1A6 1054 aa17.82■□□□□ 0.44
COL9A1-201ENST00000320755 E9PBE3 544 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 PTGESO14684 152 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 DCLK1O15075 740 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 KLHL41O60662 606 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 MAGEC1O60732 1142 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 F2P00734 622 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 JCHAINP01591 159 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 SRGAP2BP0DMP2 458 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 ACADSP16219 412 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 RAP1GDS1P52306 607 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 CFAP157Q5JU67 520 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.81■□□□□ 0.44
COL9A1-201ENST00000320755 UNKQ9C0B0 810 aaKnown RBP17.81■□□□□ 0.44
COL9A1-201ENST00000320755 SIK2Q9H0K1 926 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 LRRC40Q9H9A6 602 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 ZSWIM8A7E2V4 1837 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 A0A096LPK6 155 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 KCNE1P15382 129 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 ABCE1P61221 599 aaKnown RBP17.81■□□□□ 0.44
COL9A1-201ENST00000320755 CDC42EP1Q00587 391 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 GRB14Q14449 540 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 CCNJLQ8IV13 435 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 KBTBD2Q8IY47 623 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 GAD1Q99259 594 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 SYT15Q9BQS2 421 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 NAT9Q9BTE0 207 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 IARS2Q9NSE4 1012 aaKnown RBP17.81■□□□□ 0.44
COL9A1-201ENST00000320755 CPA4Q9UI42 421 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 SOX13Q9UN79 622 aa17.81■□□□□ 0.44
COL9A1-201ENST00000320755 GOLGA8QA0A0J9YX86 632 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 GOLGA8OA6NCC3 632 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 GOLGA8NF8WBI6 632 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 DCXO43602 365 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 HSPA4LO95757 839 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 SKIP12755 728 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 NFKB1P19838 968 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 MX2P20592 715 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 ZBTB17Q13105 803 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 TUBB3Q13509 450 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 PAFAH1B3Q15102 231 aaKnown RBP17.8■□□□□ 0.44
COL9A1-201ENST00000320755 DNAL1Q4LDG9 190 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 FAM91A1Q658Y4 838 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 RAPH1Q70E73 1250 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 KDELC2Q7Z4H8 507 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 ZNF467Q7Z7K2 595 aaPredicted RBP17.8■□□□□ 0.44
COL9A1-201ENST00000320755 PYDC1Q8WXC3 89 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 PCED1BQ96HM7 432 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 CPNE1Q99829 537 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 EIF2B3Q9NR50 452 aaKnown RBP17.8■□□□□ 0.44
COL9A1-201ENST00000320755 PACSIN3Q9UKS6 424 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 SLC39A10Q9ULF5 831 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 CORO1CQ9ULV4 474 aaPredicted RBP17.8■□□□□ 0.44
COL9A1-201ENST00000320755 SHROOM3Q8TF72 1996 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 HOXD8P13378 290 aaPredicted RBP17.8■□□□□ 0.44
COL9A1-201ENST00000320755 WARSP23381 471 aaKnown RBP17.8■□□□□ 0.44
COL9A1-201ENST00000320755 SPRP35270 261 aaPredicted RBP17.8■□□□□ 0.44
COL9A1-201ENST00000320755 GLRBP48167 497 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 ANKRD20A4Q4UJ75 823 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 RWDD4Q6NW29 188 aaKnown RBP17.8■□□□□ 0.44
COL9A1-201ENST00000320755 NAPRTQ6XQN6 538 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 PHTF2Q8N3S3 785 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 ZNF781Q8N8C0 355 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 NT5C3BQ969T7 300 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 SMOQ99835 787 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 GORASP1Q9BQQ3 440 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 TSPYL2Q9H2G4 693 aaPredicted RBP17.8■□□□□ 0.44
COL9A1-201ENST00000320755 IGSF9Q9P2J2 1179 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 PPM1HQ9ULR3 514 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 MBLAC1A4D2B0 266 aaPredicted RBP17.8■□□□□ 0.44
COL9A1-201ENST00000320755 CTSHP09668 335 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 ANPEPP15144 967 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 PSEN2P49810 448 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 SPANXN3Q5MJ09 141 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 PDZD4Q76G19 769 aaPredicted RBP17.8■□□□□ 0.44
COL9A1-201ENST00000320755 TOP6BLQ8N6T0 577 aa17.8■□□□□ 0.44
COL9A1-201ENST00000320755 WDR6Q9NNW5 1121 aaKnown RBP17.8■□□□□ 0.44
COL9A1-201ENST00000320755 CASTOR2A6NHX0 329 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 NEMP1O14524 444 aa17.79■□□□□ 0.44
COL9A1-201ENST00000320755 YBX3P16989 372 aaKnown RBP eCLIP17.79■□□□□ 0.44
COL9A1-201ENST00000320755 CD68P34810 354 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms