RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 ILVBLA1L0T0 632 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 HACD1B0YJ81 288 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 C2CD4DB7Z1M9 353 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 MCF2LO15068 1137 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 HOXC11O43248 304 aaPredicted RBP13.96□□□□□ -0.17
PRPF18-201ENST00000320054 LIASO43766 372 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 ADH1CP00326 375 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 CYP17A1P05093 508 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 CHRNA3P32297 505 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 FNTAP49354 379 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 EIF3EP60228 445 aaKnown RBP13.96□□□□□ -0.17
PRPF18-201ENST00000320054 ZNF33AQ06730 810 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 PDK1Q15118 436 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 DHCR24Q15392 516 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 PARP15Q460N3 678 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 LY6G5CQ5SRR4 150 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 CXorf57Q6NSI4 855 aaKnown RBP13.96□□□□□ -0.17
PRPF18-201ENST00000320054 TPGS1Q6ZTW0 290 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 CCDC117Q8IWD4 279 aaPredicted RBP13.96□□□□□ -0.17
PRPF18-201ENST00000320054 FIBINQ8TAL6 211 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 C1orf54Q8WWF1 131 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 MAGOHBQ96A72 148 aaKnown RBP13.96□□□□□ -0.17
PRPF18-201ENST00000320054 HAUS1Q96CS2 278 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 P2RY11Q96G91 374 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 RUNDC3BQ96NL0 473 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 TRMT61BQ9BVS5 477 aaKnown RBP13.96□□□□□ -0.17
PRPF18-201ENST00000320054 BBS2Q9BXC9 721 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 SLC2A11Q9BYW1 496 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 MAGEH1Q9H213 219 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 IGSF9Q9P2J2 1179 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 DRG1Q9Y295 367 aaKnown RBP13.96□□□□□ -0.17
PRPF18-201ENST00000320054 NUMBLQ9Y6R0 609 aa13.96□□□□□ -0.17
PRPF18-201ENST00000320054 H0Y626 953 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 PPP1R12AO14974 1030 aaPredicted RBP13.95□□□□□ -0.18
PRPF18-201ENST00000320054 RAMP2O60895 175 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 ITGAVP06756 1048 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 RHOCP08134 193 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 ADH5P11766 374 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 ETFBP38117 255 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 COILP38432 576 aaPredicted RBP13.95□□□□□ -0.18
PRPF18-201ENST00000320054 GNA12Q03113 381 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 GAD2Q05329 585 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 SLC12A1Q13621 1099 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 CDH18Q13634 790 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 BYSLQ13895 437 aaKnown RBP13.95□□□□□ -0.18
PRPF18-201ENST00000320054 OASLQ15646 514 aaKnown RBP13.95□□□□□ -0.18
PRPF18-201ENST00000320054 TRIM68Q6AZZ1 485 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 CARNMT1Q8N4J0 409 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 CPA6Q8N4T0 437 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 ATG4AQ8WYN0 398 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 HDAC11Q96DB2 347 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 TSGA13Q96PP4 275 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 QKIQ96PU8 341 aaKnown RBP eCLIP13.95□□□□□ -0.18
PRPF18-201ENST00000320054 SLC39A8Q9C0K1 460 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 HPS4Q9NQG7 708 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 PCYOX1Q9UHG3 505 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 DNPEPQ9ULA0 475 aa13.95□□□□□ -0.18
PRPF18-201ENST00000320054 MYO18AQ92614 2054 aaKnown RBP13.94□□□□□ -0.18
PRPF18-201ENST00000320054 BCLAF3A2AJT9 711 aaKnown RBP13.94□□□□□ -0.18
PRPF18-201ENST00000320054 CFAP69A5D8W1 941 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 ARHGAP42A6NI28 874 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 RASA4BC9J798 803 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 NEDD8-MDP1E9PL57 170 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 H7C0C1 242 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 RASA4O43374 803 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 CACNG3O60359 315 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 SLU7O95391 586 aaKnown RBP13.94□□□□□ -0.18
PRPF18-201ENST00000320054 RBP3P10745 1247 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 TYRP14679 529 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 ARSAP15289 507 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 GDI1P31150 447 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 GARSP41250 739 aaKnown RBP13.94□□□□□ -0.18
PRPF18-201ENST00000320054 ATP5OP48047 213 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 PLK1P53350 603 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 TUBB4BP68371 445 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 LMNB2Q03252 620 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 C2orf54Q08AI8 447 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 NR1H3Q13133 447 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 RUNX3Q13761 415 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 GRM2Q14416 872 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 POLD3Q15054 466 aaPredicted RBP13.94□□□□□ -0.18
PRPF18-201ENST00000320054 PRKD1Q15139 912 aaPredicted RBP13.94□□□□□ -0.18
PRPF18-201ENST00000320054 ANO4Q32M45 955 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 SLC45A4Q5BKX6 768 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 TTC27Q6P3X3 843 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 CDKL3Q8IVW4 592 aaPredicted RBP13.94□□□□□ -0.18
PRPF18-201ENST00000320054 MFN1Q8IWA4 741 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 MMGT1Q8N4V1 131 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 ATL2Q8NHH9 583 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 TFB1MQ8WVM0 346 aaKnown RBP13.94□□□□□ -0.18
PRPF18-201ENST00000320054 SLCO2A1Q92959 643 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 ARHGEF2Q92974 986 aaKnown RBP13.94□□□□□ -0.18
PRPF18-201ENST00000320054 FATE1Q969F0 183 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 CELF6Q96J87 481 aaKnown RBP13.94□□□□□ -0.18
PRPF18-201ENST00000320054 ZFYVE19Q96K21 471 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 FAM118BQ9BPY3 351 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 RPP25Q9BUL9 199 aaKnown RBP13.94□□□□□ -0.18
PRPF18-201ENST00000320054 DDX47Q9H0S4 455 aaKnown RBP13.94□□□□□ -0.18
PRPF18-201ENST00000320054 EBF3Q9H4W6 596 aa13.94□□□□□ -0.18
PRPF18-201ENST00000320054 ECT2Q9H8V3 914 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms