RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 ERVMER34-1Q9H9K5 563 aa14.7□□□□□ -0.06
RPP40-201ENST00000319533 XPO7Q9UIA9 1087 aaKnown RBP14.7□□□□□ -0.06
RPP40-201ENST00000319533 TP53BP1Q12888 1972 aaPredicted RBP14.7□□□□□ -0.06
RPP40-201ENST00000319533 BICDL2A1A5D9 508 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 FAM149AA5PLN7 773 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 FAM47DPA6NHR8 397 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 BIN1O00499 593 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 ENC1O14682 589 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 WNT9AO14904 365 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 LATO43561 262 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 RNASEH2AO75792 299 aaKnown RBP14.69□□□□□ -0.06
RPP40-201ENST00000319533 ADH1BP00325 375 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 TACR2P21452 398 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 RXRGP48443 463 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 ADPRHP54922 357 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 MORC3Q14149 939 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 ELAVL3Q14576 367 aaKnown RBP14.69□□□□□ -0.06
RPP40-201ENST00000319533 KLHL10Q6JEL2 608 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 GATAD2AQ86YP4 633 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 LGI2Q8N0V4 545 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 ADAM32Q8TC27 787 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 TSC1Q92574 1164 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 BTN2A3PQ96KV6 586 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 PRMT1Q99873 361 aaKnown RBP14.69□□□□□ -0.06
RPP40-201ENST00000319533 GDF3Q9NR23 364 aa14.69□□□□□ -0.06
RPP40-201ENST00000319533 NYNRINQ9P2P1 1898 aaKnown RBP14.68□□□□□ -0.06
RPP40-201ENST00000319533 MOCS2O96007 188 aaPredicted RBP14.68□□□□□ -0.06
RPP40-201ENST00000319533 APOEP02649 317 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 MZF1P28698 734 aaPredicted RBP14.68□□□□□ -0.06
RPP40-201ENST00000319533 EPHA8P29322 1005 aaPredicted RBP14.68□□□□□ -0.06
RPP40-201ENST00000319533 DRD3P35462 400 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 MARSP56192 900 aaKnown RBP14.68□□□□□ -0.06
RPP40-201ENST00000319533 NXPH1P58417 271 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 CAMK4Q16566 473 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 CCDC40Q4G0X9 1142 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 ZC3H12AQ5D1E8 599 aaKnown RBP14.68□□□□□ -0.06
RPP40-201ENST00000319533 PRAMEF14Q5SWL7 426 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 RAP1GAP2Q684P5 730 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 DENND1BQ6P3S1 775 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 CLEC17AQ6ZS10 378 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 KANSL1Q7Z3B3 1105 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 TRIM59Q8IWR1 403 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 STK40Q8N2I9 435 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 FRS2Q8WU20 508 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 NELFBQ8WX92 580 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 FAM149B1Q96BN6 582 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 BBC3Q96PG8 261 aaPredicted RBP14.68□□□□□ -0.06
RPP40-201ENST00000319533 KDM4CQ9H3R0 1056 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 THAP9Q9H5L6 903 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 POPDC2Q9HBU9 364 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 AASDHPPTQ9NRN7 309 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.68□□□□□ -0.06
RPP40-201ENST00000319533 CYTH4Q9UIA0 394 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 CTNND2Q9UQB3 1225 aa14.68□□□□□ -0.06
RPP40-201ENST00000319533 KCNU1A8MYU2 1149 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 PPP1R3GB7ZBB8 358 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 TLR4O00206 839 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 CAPN9O14815 690 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 SLC7A4O43246 635 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 RFPL3O75679 317 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 LDOC1O95751 146 aaPredicted RBP14.67□□□□□ -0.06
RPP40-201ENST00000319533 TRUB2O95900 331 aaKnown RBP14.67□□□□□ -0.06
RPP40-201ENST00000319533 ITGAVP06756 1048 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 BMP6P22004 513 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 NUDT1P36639 197 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 PSMD8P48556 350 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 ACADVLP49748 655 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 STK19P49842 368 aaPredicted RBP14.67□□□□□ -0.06
RPP40-201ENST00000319533 CLCN6P51797 869 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 YWHAZP63104 245 aaKnown RBP14.67□□□□□ -0.06
RPP40-201ENST00000319533 SULT2A1Q06520 285 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 KCNH2Q12809 1159 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 PAK1Q13153 545 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 SFMBT2Q5VUG0 894 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 RNF219Q5W0B1 726 aaPredicted RBP14.67□□□□□ -0.06
RPP40-201ENST00000319533 NAPEPLDQ6IQ20 393 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 IQCHQ86VS3 1027 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 CHSY1Q86X52 802 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 OXR1Q8N573 874 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 ATP6V0D2Q8N8Y2 350 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 MFSD2AQ8NA29 543 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 OR14C36Q8NHC7 312 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 ALG14Q96F25 216 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 MS4A3Q96HJ5 214 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 LRIG1Q96JA1 1093 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 SERAC1Q96JX3 654 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 CNDP2Q96KP4 475 aaKnown RBP14.67□□□□□ -0.06
RPP40-201ENST00000319533 RPL10LQ96L21 214 aaKnown RBP14.67□□□□□ -0.06
RPP40-201ENST00000319533 GBP4Q96PP9 640 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 SPAG5Q96R06 1193 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 MED15Q96RN5 788 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 ST7Q9NRC1 585 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 KIAA1468Q9P260 1216 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 ARHGAP20Q9P2F6 1191 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 TJP2Q9UDY2 1190 aa14.67□□□□□ -0.06
RPP40-201ENST00000319533 ARID1BQ8NFD5 2236 aaPredicted RBP14.66□□□□□ -0.06
RPP40-201ENST00000319533 ASXL3Q9C0F0 2248 aa14.66□□□□□ -0.06
RPP40-201ENST00000319533 E5RJQ4 531 aa14.66□□□□□ -0.06
RPP40-201ENST00000319533 F5H5T6 163 aa14.66□□□□□ -0.06
RPP40-201ENST00000319533 CBX4O00257 560 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms