RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 SDE2Q6IQ49 451 aa17.07■□□□□ 0.32
LRRC42-201ENST00000319223 WDR5BQ86VZ2 330 aa17.07■□□□□ 0.32
LRRC42-201ENST00000319223 NLRP14Q86W24 1093 aa17.07■□□□□ 0.32
LRRC42-201ENST00000319223 LONP2Q86WA8 852 aa17.07■□□□□ 0.32
LRRC42-201ENST00000319223 RASSF3Q86WH2 238 aa17.07■□□□□ 0.32
LRRC42-201ENST00000319223 TPSD1Q9BZJ3 242 aa17.07■□□□□ 0.32
LRRC42-201ENST00000319223 USP18Q9UMW8 372 aa17.07■□□□□ 0.32
LRRC42-201ENST00000319223 TFR2Q9UP52 801 aa17.07■□□□□ 0.32
LRRC42-201ENST00000319223 PLA2G4CQ9UP65 541 aa17.07■□□□□ 0.32
LRRC42-201ENST00000319223 ERVW-1Q9UQF0 538 aa17.07■□□□□ 0.32
LRRC42-201ENST00000319223 PCDHGA2Q9Y5H1 932 aa17.07■□□□□ 0.32
LRRC42-201ENST00000319223 FANCMQ8IYD8 2048 aa17.07■□□□□ 0.32
LRRC42-201ENST00000319223 ATP5BP06576 529 aaKnown RBP17.06■□□□□ 0.32
LRRC42-201ENST00000319223 RHOCP08134 193 aa17.06■□□□□ 0.32
LRRC42-201ENST00000319223 OR1E1P30953 314 aa17.06■□□□□ 0.32
LRRC42-201ENST00000319223 L1CAMP32004 1257 aa17.06■□□□□ 0.32
LRRC42-201ENST00000319223 STK19P49842 368 aaPredicted RBP17.06■□□□□ 0.32
LRRC42-201ENST00000319223 SLC12A1Q13621 1099 aa17.06■□□□□ 0.32
LRRC42-201ENST00000319223 PIGHQ14442 188 aaPredicted RBP17.06■□□□□ 0.32
LRRC42-201ENST00000319223 FNDC3BQ53EP0 1204 aaKnown RBP17.06■□□□□ 0.32
LRRC42-201ENST00000319223 ERMARDQ5T6L9 678 aa17.06■□□□□ 0.32
LRRC42-201ENST00000319223 SERPINA13PQ6UXR4 307 aa17.06■□□□□ 0.32
LRRC42-201ENST00000319223 HMGB4Q8WW32 186 aa17.06■□□□□ 0.32
LRRC42-201ENST00000319223 ATRIPQ8WXE1 791 aa17.06■□□□□ 0.32
LRRC42-201ENST00000319223 TBC1D31Q96DN5 1066 aa17.06■□□□□ 0.32
LRRC42-201ENST00000319223 RPL10LQ96L21 214 aaKnown RBP17.06■□□□□ 0.32
LRRC42-201ENST00000319223 PSMB7Q99436 277 aa17.06■□□□□ 0.32
LRRC42-201ENST00000319223 POLMQ9NP87 494 aaPredicted RBP17.06■□□□□ 0.32
LRRC42-201ENST00000319223 EBF1Q9UH73 591 aa17.06■□□□□ 0.32
LRRC42-201ENST00000319223 IP6K2Q9UHH9 426 aa17.06■□□□□ 0.32
LRRC42-201ENST00000319223 SLCO3A1Q9UIG8 710 aa17.06■□□□□ 0.32
LRRC42-201ENST00000319223 AP4E1Q9UPM8 1137 aa17.06■□□□□ 0.32
LRRC42-201ENST00000319223 MYO1FO00160 1098 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 NPC1O15118 1278 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 AXIN1O15169 862 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 CREB3O43889 395 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 DESP17661 470 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 GABRG2P18507 467 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 PCK1P35558 622 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 AIF1P55008 147 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 ACAP1Q15027 740 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 TMEM139Q8IV31 216 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 NIPA2Q8N8Q9 360 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 OR7D4Q8NG98 312 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 SLC35G2Q8TBE7 412 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 KCTD15Q96SI1 283 aaPredicted RBP17.05■□□□□ 0.32
LRRC42-201ENST00000319223 DHX35Q9H5Z1 703 aaKnown RBP17.05■□□□□ 0.32
LRRC42-201ENST00000319223 UVRAGQ9P2Y5 699 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 DNAI1Q9UI46 699 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 INVSQ9Y283 1065 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 EML5Q05BV3 1969 aa17.05■□□□□ 0.32
LRRC42-201ENST00000319223 PRPSAP2O60256 369 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 SNAP91O60641 907 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 MOCS3O95396 460 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 LCA5LO95447 670 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 EPHX1P07099 455 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 RHOQP17081 205 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 GLDCP23378 1020 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 ECT2LQ008S8 904 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 SMTNL2Q2TAL5 461 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 KCNT1Q5JUK3 1230 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 RAD9BQ6WBX8 426 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 SETD3Q86TU7 594 aaPredicted RBP17.04■□□□□ 0.32
LRRC42-201ENST00000319223 MUC3BQ9H195 1237 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 TMEM248Q9NWD8 314 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 IMPACTQ9P2X3 320 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 VPS28Q9UK41 221 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 MYO15AQ9UKN7 3530 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 CCDC163A0A0D9SF12 145 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 TTC34A8MYJ7 566 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 ASLP04424 464 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 NDUFV2P19404 249 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 EPHB2P29323 1055 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 MAGEA1P43355 309 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 OXCT1P55809 520 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 SLC25A11Q02978 314 aaKnown RBP17.04■□□□□ 0.32
LRRC42-201ENST00000319223 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.04■□□□□ 0.32
LRRC42-201ENST00000319223 CCDC170Q8IYT3 715 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 FRMD1Q8N878 549 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 RLN3Q8WXF3 142 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 MKRN2Q9H000 416 aaKnown RBP17.04■□□□□ 0.32
LRRC42-201ENST00000319223 ZWILCHQ9H900 591 aa17.04■□□□□ 0.32
LRRC42-201ENST00000319223 DCLK1O15075 740 aa17.03■□□□□ 0.32
LRRC42-201ENST00000319223 RARAP10276 462 aa17.03■□□□□ 0.32
LRRC42-201ENST00000319223 ACVRL1P37023 503 aa17.03■□□□□ 0.32
LRRC42-201ENST00000319223 C6orf118Q5T5N4 469 aa17.03■□□□□ 0.32
LRRC42-201ENST00000319223 ZC3H14Q6PJT7 736 aaKnown RBP17.03■□□□□ 0.32
LRRC42-201ENST00000319223 TMTC1Q8IUR5 882 aa17.03■□□□□ 0.32
LRRC42-201ENST00000319223 PGBD3Q8N328 593 aa17.03■□□□□ 0.32
LRRC42-201ENST00000319223 MRGPRX1Q96LB2 322 aa17.03■□□□□ 0.32
LRRC42-201ENST00000319223 NOL6Q9H6R4 1146 aaKnown RBP17.03■□□□□ 0.32
LRRC42-201ENST00000319223 CD93Q9NPY3 652 aa17.03■□□□□ 0.32
LRRC42-201ENST00000319223 PRSS16Q9NQE7 514 aa17.03■□□□□ 0.32
LRRC42-201ENST00000319223 BCCIPQ9P287 314 aaKnown RBP eCLIP17.03■□□□□ 0.32
LRRC42-201ENST00000319223 REXO2Q9Y3B8 237 aaKnown RBP17.03■□□□□ 0.32
LRRC42-201ENST00000319223 PCDHA13Q9Y5I0 950 aa17.03■□□□□ 0.32
LRRC42-201ENST00000319223 EPN1Q9Y6I3 576 aaPredicted RBP17.03■□□□□ 0.32
LRRC42-201ENST00000319223 DMDP11532 3685 aa17.02■□□□□ 0.32
LRRC42-201ENST00000319223 ILVBLA1L0T0 632 aa17.02■□□□□ 0.32
LRRC42-201ENST00000319223 TMEM110-MUSTN1A8MSY1 372 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms