RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 BECN1Q14457 450 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 C19orf48Q6RUI8 117 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 CIR1Q86X95 450 aaPredicted RBP18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 OR2T34Q8NGX1 318 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 MED15Q96RN5 788 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 OMDQ99983 421 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 GPSM3Q9Y4H4 160 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 CEP83Q9Y592 693 aa18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 NYNRINQ9P2P1 1898 aaKnown RBP18.03■□□□□ 0.48
EXOSC4-201ENST00000316052 TNFSF14O43557 240 aa18.02■□□□□ 0.48
EXOSC4-201ENST00000316052 GOT1P17174 413 aa18.02■□□□□ 0.48
EXOSC4-201ENST00000316052 SLC9A1P19634 815 aa18.02■□□□□ 0.48
EXOSC4-201ENST00000316052 MZF1P28698 734 aaPredicted RBP18.02■□□□□ 0.48
EXOSC4-201ENST00000316052 C21orf59P57076 290 aa18.02■□□□□ 0.48
EXOSC4-201ENST00000316052 SFSWAPQ12872 951 aaKnown RBP18.02■□□□□ 0.48
EXOSC4-201ENST00000316052 PDCLQ13371 301 aa18.02■□□□□ 0.48
EXOSC4-201ENST00000316052 TRIM62Q9BVG3 475 aa18.02■□□□□ 0.48
EXOSC4-201ENST00000316052 ACE2Q9BYF1 805 aaPredicted RBP18.02■□□□□ 0.48
EXOSC4-201ENST00000316052 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.02■□□□□ 0.48
EXOSC4-201ENST00000316052 FZD4Q9ULV1 537 aa18.02■□□□□ 0.48
EXOSC4-201ENST00000316052 A0A1B0GTQ1 180 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 A0A1W2PR77 199 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 FAM149AA5PLN7 773 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 LRRC72A6NJI9 287 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 F5H5T6 163 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 PDGFRAP16234 1089 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 METAP1P53582 386 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 SHBQ15464 509 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 ARHGAP44Q17R89 818 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 CCDC157Q569K6 752 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 TRIM65Q6PJ69 517 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 GATAD2AQ86YP4 633 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 DEFB106AQ8N104 65 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 CCAR2Q8N163 923 aaKnown RBP18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 ATP6V0D2Q8N8Y2 350 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 FRS2Q8WU20 508 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 SLC2A13Q96QE2 648 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 CPXM1Q96SM3 734 aa18.01■□□□□ 0.47
EXOSC4-201ENST00000316052 SYNJ2BP-COX16A0A087WUM0 186 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 PLK4O00444 970 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 DFNA5O60443 496 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 C5AR1P21730 350 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 USP8P40818 1118 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 CCR5P51681 352 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 PLK1P53350 603 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 ADPRHP54922 357 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 CAMK2BQ13554 666 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 RNF219Q5W0B1 726 aaPredicted RBP18■□□□□ 0.47
EXOSC4-201ENST00000316052 CXorf57Q6NSI4 855 aaKnown RBP18■□□□□ 0.47
EXOSC4-201ENST00000316052 FBXL22Q6P050 247 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18■□□□□ 0.47
EXOSC4-201ENST00000316052 SND1Q7KZF4 910 aaKnown RBP eCLIP18■□□□□ 0.47
EXOSC4-201ENST00000316052 ENOSF1Q7L5Y1 443 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 OR52K2Q8NGK3 314 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 OR14C36Q8NHC7 312 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 ALG14Q96F25 216 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 ELF4Q99607 663 aaPredicted RBP18■□□□□ 0.47
EXOSC4-201ENST00000316052 FAM204AQ9H8W3 233 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 AASDHPPTQ9NRN7 309 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 DDIT4Q9NX09 232 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 COX16Q9P0S2 106 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 SLC12A6Q9UHW9 1150 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 RAXQ9Y2V3 346 aa18■□□□□ 0.47
EXOSC4-201ENST00000316052 TRABD2BA6NFA1 517 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 CBX4O00257 560 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 GRAP2O75791 330 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 ADH1BP00325 375 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 IL1BP01584 269 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 CD38P28907 300 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 DRD3P35462 400 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 IRAK1P51617 712 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 PPP2CBP62714 309 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 PPP2CAP67775 309 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 CDK17Q00537 523 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 CENPCQ03188 943 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 SLC12A1Q13621 1099 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 COL9A2Q14055 689 aaPredicted RBP17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 SMAD1Q15797 465 aaKnown RBP17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 DHRS13Q6UX07 377 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 IRF2BP1Q8IU81 584 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 CREBRFQ8IUR6 639 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 PASD1Q8IV76 773 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 PPP1R13BQ96KQ4 1090 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 SARDHQ9UL12 918 aa17.99■□□□□ 0.47
EXOSC4-201ENST00000316052 FGFR1OPO95684 399 aaKnown RBP17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 GLI1P08151 1106 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 SLC2A3P11169 496 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 ABCB4P21439 1286 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 CCR1P32246 355 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 NNMTP40261 264 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 SULT2A1Q06520 285 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 CYP4F3Q08477 520 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 AUHQ13825 339 aaKnown RBP17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 ELAVL3Q14576 367 aaKnown RBP17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 GALNT15Q8N3T1 639 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 SAP25Q8TEE9 199 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 SHC3Q92529 594 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 RNF34Q969K3 372 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 SERAC1Q96JX3 654 aa17.98■□□□□ 0.47
EXOSC4-201ENST00000316052 FEM1AQ9BSK4 669 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms