RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 FUNDC1Q8IVP5 155 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 FAM71DQ8N9W8 422 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 GRIN3AQ8TCU5 1115 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 STYXQ8WUJ0 223 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 TRAPPC12Q8WVT3 735 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 ZNF597Q96LX8 424 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 SLC9A7Q96T83 725 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 MRPL4Q9BYD3 311 aaKnown RBP8.04□□□□□ -1.12
CNOT4-201ENST00000315544 B3GNT5Q9BYG0 378 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 PITPNM3Q9BZ71 974 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 XPO7Q9UIA9 1087 aaKnown RBP8.04□□□□□ -1.12
CNOT4-201ENST00000315544 KIAA1257Q9ULG3 409 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 TTC24A2A3L6 582 aaPredicted RBP8.04□□□□□ -1.12
CNOT4-201ENST00000315544 FCHO1O14526 889 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 TKTL1P51854 596 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 CDKL1Q00532 357 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 SLC34A1Q06495 639 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 TLR1Q15399 786 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 SMTNL2Q2TAL5 461 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 ARHGEF16Q5VV41 709 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 C9orf57Q5W0N0 161 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 PACS1Q6VY07 963 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 PHLDB2Q86SQ0 1253 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 SERINC5Q86VE9 423 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 LZTR1Q8N653 840 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 PDPRQ8NCN5 879 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.04□□□□□ -1.12
CNOT4-201ENST00000315544 N4BP2L2Q92802 583 aaPredicted RBP8.04□□□□□ -1.12
CNOT4-201ENST00000315544 MSTO1Q9BUK6 570 aa8.04□□□□□ -1.12
CNOT4-201ENST00000315544 NOP53Q9NZM5 478 aaKnown RBP8.04□□□□□ -1.12
CNOT4-201ENST00000315544 PRR5-ARHGAP8B1AHC4 643 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 MFSD11O43934 449 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 PGK1P00558 417 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 STAG3L1P0CL83 205 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 SETSIPP0DME0 302 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 ANPEPP15144 967 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 NDST1P52848 882 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 ARHGAP8P85298 464 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 OLIG2Q13516 323 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 DUOXA2Q1HG44 320 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 IQCCQ4KMZ1 466 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 NHSL2Q5HYW2 709 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 CWF19L1Q69YN2 538 aaKnown RBP8.03□□□□□ -1.12
CNOT4-201ENST00000315544 DARS2Q6PI48 645 aaKnown RBP8.03□□□□□ -1.12
CNOT4-201ENST00000315544 MRPL10Q7Z7H8 261 aaKnown RBP8.03□□□□□ -1.12
CNOT4-201ENST00000315544 LONP2Q86WA8 852 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 UNC93AQ86WB7 457 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 NUP93Q8N1F7 819 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 ATP11CQ8NB49 1132 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 HDAC11Q96DB2 347 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 MTBPQ96DY7 904 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 TRIB3Q96RU7 358 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 RBBP8Q99708 897 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 HNRNPABQ99729 332 aaKnown RBP8.03□□□□□ -1.12
CNOT4-201ENST00000315544 EIF2AQ9BY44 585 aaKnown RBP8.03□□□□□ -1.12
CNOT4-201ENST00000315544 STMN4Q9H169 189 aaPredicted RBP8.03□□□□□ -1.12
CNOT4-201ENST00000315544 S100A14Q9HCY8 104 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 CRTAC1Q9NQ79 661 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 PRDM5Q9NQX1 630 aaPredicted RBP8.03□□□□□ -1.12
CNOT4-201ENST00000315544 PIGVQ9NUD9 493 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 RNF19AQ9NV58 838 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 OXSMQ9NWU1 459 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 GTSE1Q9NYZ3 720 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 TMEM216Q9P0N5 145 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 ZFATQ9P243 1243 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 TUBGCP4Q9UGJ1 667 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 CDH7Q9ULB5 785 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 MTO1Q9Y2Z2 717 aaKnown RBP8.03□□□□□ -1.12
CNOT4-201ENST00000315544 C7orf72A4D263 438 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 TMEM132AQ24JP5 1023 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 ATF7IP2Q5U623 682 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 APBB1IPQ7Z5R6 666 aaPredicted RBP8.03□□□□□ -1.12
CNOT4-201ENST00000315544 ZNF567Q8N184 647 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 NLRP7Q8WX94 980 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 RXFP2Q8WXD0 754 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 CLPTM1LQ96KA5 538 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 HMX1Q9NP08 348 aaPredicted RBP8.03□□□□□ -1.12
CNOT4-201ENST00000315544 COPG2Q9UBF2 871 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 ZNHIT2Q9UHR6 403 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 PADI4Q9UM07 663 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 CFAP54Q96N23 3096 aa8.03□□□□□ -1.12
CNOT4-201ENST00000315544 A0A1B0GVG6 124 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 HACD1B0YJ81 288 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 NRP1O14786 923 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 ANKRD28O15084 1053 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 GREM1O60565 184 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 DCTN3O75935 186 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 F11P03951 625 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 KCNC1P48547 511 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 GZMMP51124 257 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 AFF1P51825 1210 aaKnown RBP8.02□□□□□ -1.12
CNOT4-201ENST00000315544 ACLYP53396 1101 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 DNAJB13P59910 316 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 FAM189BP81408 668 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 MBTPS1Q14703 1052 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 HERC3Q15034 1050 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 TTC39BQ5VTQ0 682 aaPredicted RBP8.02□□□□□ -1.12
CNOT4-201ENST00000315544 KDELC1Q6UW63 502 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 LRRC74BQ6ZQY2 392 aa8.02□□□□□ -1.12
CNOT4-201ENST00000315544 ZC3HC1Q86WB0 502 aaKnown RBP8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms