RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 LAMP2P13473 410 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 ATP5OP48047 213 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 TUBB4BP68371 445 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 XRCC4Q13426 336 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 OASLQ15646 514 aaKnown RBP16.56■□□□□ 0.24
TUBB3-201ENST00000315491 MPPE1Q53F39 396 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 ZC3H18Q86VM9 953 aaKnown RBP16.56■□□□□ 0.24
TUBB3-201ENST00000315491 TP53INP2Q8IXH6 220 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 CCDC105Q8IYK2 499 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 CCDC33Q8N5R6 958 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 ATL2Q8NHH9 583 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 OTUB2Q96DC9 234 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 CELF6Q96J87 481 aaKnown RBP16.56■□□□□ 0.24
TUBB3-201ENST00000315491 PARD6BQ9BYG5 372 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 ZFP14Q9HCL3 533 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 PCYOX1Q9UHG3 505 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 AMACRQ9UHK6 382 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 DRG1Q9Y295 367 aaKnown RBP16.56■□□□□ 0.24
TUBB3-201ENST00000315491 WNT6Q9Y6F9 365 aa16.56■□□□□ 0.24
TUBB3-201ENST00000315491 A0A1B0GVM2 712 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 GRXCR2A6NFK2 248 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 TCAF2A6NFQ2 919 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 MX2P20592 715 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 OR1E1P30953 314 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 GTF2A1P52655 376 aaPredicted RBP16.55■□□□□ 0.24
TUBB3-201ENST00000315491 NDST2P52849 883 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 GALNT2Q10471 571 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 SMAD4Q13485 552 aaKnown RBP16.55■□□□□ 0.24
TUBB3-201ENST00000315491 PDK1Q15118 436 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 AFMIDQ63HM1 303 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 TANGO2Q6ICL3 276 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 C8orf74Q6P047 294 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 TPGS1Q6ZTW0 290 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 ARHGAP12Q8IWW6 846 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 UMODL1-AS1Q8N2C9 162 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 CCDC26Q8TAB7 109 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 DDI1Q8WTU0 396 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 E2F7Q96AV8 911 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 CCDC114Q96M63 670 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 SLC39A8Q9C0K1 460 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 LINC00597Q9H2U6 94 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 ZNF148Q9UQR1 794 aa16.55■□□□□ 0.24
TUBB3-201ENST00000315491 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.54■□□□□ 0.24
TUBB3-201ENST00000315491 HACD1B0YJ81 288 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 PPP1R12AO14974 1030 aaPredicted RBP16.54■□□□□ 0.24
TUBB3-201ENST00000315491 NCAM2O15394 837 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 RAD51CO43502 376 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 CYBBP04839 570 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 ITGAVP06756 1048 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 LMAN1P49257 510 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 MRPS25P82663 173 aaKnown RBP16.54■□□□□ 0.24
TUBB3-201ENST00000315491 ZNF177Q13360 481 aaPredicted RBP16.54■□□□□ 0.24
TUBB3-201ENST00000315491 DHX34Q14147 1143 aaKnown RBP16.54■□□□□ 0.24
TUBB3-201ENST00000315491 DARS2Q6PI48 645 aaKnown RBP16.54■□□□□ 0.24
TUBB3-201ENST00000315491 CDKL3Q8IVW4 592 aaPredicted RBP16.54■□□□□ 0.24
TUBB3-201ENST00000315491 GRK7Q8WTQ7 553 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 OSCP1Q8WVF1 389 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 LRRC1Q9BTT6 524 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 NOL6Q9H6R4 1146 aaKnown RBP16.54■□□□□ 0.24
TUBB3-201ENST00000315491 C10orf88Q9H8K7 445 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 DUS2Q9NX74 493 aaKnown RBP16.54■□□□□ 0.24
TUBB3-201ENST00000315491 DENND4AQ7Z401 1863 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 H3BQF6 201 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 DFFAO00273 331 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 MBTPS2O43462 519 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 RAMP2O60895 175 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 PTGIRP43119 386 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 IFNAR2P48551 515 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 DR1Q01658 176 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 LMNB2Q03252 620 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 SLC45A4Q5BKX6 768 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 MPP7Q5T2T1 576 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 C6orf118Q5T5N4 469 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 B4GALNT4Q76KP1 1039 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 OTOP3Q7RTS5 596 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 MAATS1Q7Z4T9 603 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 ST13P5Q8NFI4 369 aaPredicted RBP16.54■□□□□ 0.24
TUBB3-201ENST00000315491 LRRN4Q8WUT4 740 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 TFB1MQ8WVM0 346 aaKnown RBP16.54■□□□□ 0.24
TUBB3-201ENST00000315491 SLCO2A1Q92959 643 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 IRF7Q92985 503 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 P2RY11Q96G91 374 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 QKIQ96PU8 341 aaKnown RBP eCLIP16.54■□□□□ 0.24
TUBB3-201ENST00000315491 TMEM121Q9BTD3 319 aa16.54■□□□□ 0.24
TUBB3-201ENST00000315491 BCLAF3A2AJT9 711 aaKnown RBP16.53■□□□□ 0.24
TUBB3-201ENST00000315491 TTI1O43156 1089 aa16.53■□□□□ 0.24
TUBB3-201ENST00000315491 LUC7L3O95232 432 aaKnown RBP16.53■□□□□ 0.24
TUBB3-201ENST00000315491 ECEL1O95672 775 aa16.53■□□□□ 0.24
TUBB3-201ENST00000315491 RHOCP08134 193 aa16.53■□□□□ 0.24
TUBB3-201ENST00000315491 CHRM1P11229 460 aaPredicted RBP16.53■□□□□ 0.24
TUBB3-201ENST00000315491 GARSP41250 739 aaKnown RBP16.53■□□□□ 0.24
TUBB3-201ENST00000315491 GLE1Q53GS7 698 aaKnown RBP16.53■□□□□ 0.24
TUBB3-201ENST00000315491 FYB2Q5VWT5 728 aa16.53■□□□□ 0.24
TUBB3-201ENST00000315491 CCDC70Q6NSX1 233 aa16.53■□□□□ 0.24
TUBB3-201ENST00000315491 VITQ6UXI7 678 aa16.53■□□□□ 0.24
TUBB3-201ENST00000315491 SETD3Q86TU7 594 aaPredicted RBP16.53■□□□□ 0.24
TUBB3-201ENST00000315491 TMEM25Q86YD3 366 aa16.53■□□□□ 0.24
TUBB3-201ENST00000315491 ADGRG2Q8IZP9 1017 aa16.53■□□□□ 0.24
TUBB3-201ENST00000315491 CARNMT1Q8N4J0 409 aa16.53■□□□□ 0.24
TUBB3-201ENST00000315491 ALLCQ8N6M5 410 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms