RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SLC18A2Q05940 514 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 PDK4Q16654 411 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 KCTD11Q693B1 232 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 FBXO32Q969P5 355 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 SEPT5Q99719 369 aaPredicted RBP18.8■□□□□ 0.6
CCDC43-201ENST00000315286 SLC39A8Q9C0K1 460 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 MPP6Q9NZW5 540 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 TANC1Q9C0D5 1861 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 ARHGAP42A6NI28 874 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 PGAM1P18669 254 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 TBX4P57082 545 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 ZNF33AQ06730 810 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 EFEMP1Q12805 493 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 ELAVL2Q12926 359 aaKnown RBP18.8■□□□□ 0.6
CCDC43-201ENST00000315286 DNAJC3Q13217 504 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 LGSNQ5TDP6 509 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 PIK3R6Q5UE93 754 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 ITPRIPL1Q6GPH6 555 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 PRSS55Q6UWB4 352 aaPredicted RBP18.8■□□□□ 0.6
CCDC43-201ENST00000315286 CCNJLQ8IV13 435 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 CNTD1Q8N815 330 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 SPPL2BQ8TCT7 592 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 USP33Q8TEY7 942 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 TSGA13Q96PP4 275 aa18.8■□□□□ 0.6
CCDC43-201ENST00000315286 TM9SF1O15321 606 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 LPXNO60711 386 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 CCNCP24863 283 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 TAF10Q12962 218 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 DUSP4Q13115 394 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 BMPR2Q13873 1038 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 SEPT7Q16181 437 aaKnown RBP18.79■□□□□ 0.6
CCDC43-201ENST00000315286 RASIP1Q5U651 963 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 CGB2Q6NT52 195 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 SLC39A5Q6ZMH5 540 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.79■□□□□ 0.67e-6■□□□□ 10.9
CCDC43-201ENST00000315286 RGS9BPQ6ZS82 235 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 FAM43BQ6ZT52 329 aaPredicted RBP18.79■□□□□ 0.6
CCDC43-201ENST00000315286 CCDC121Q6ZUS5 278 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 FAM47EQ6ZV65 393 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 ANKRD33Q7Z3H0 272 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 C1orf74Q96LT6 269 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 TTPALQ9BTX7 342 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 PITPNM3Q9BZ71 974 aa18.79■□□□□ 0.6
CCDC43-201ENST00000315286 USP15Q9Y4E8 981 aaPredicted RBP18.79■□□□□ 0.6
CCDC43-201ENST00000315286 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.78■□□□□ 0.6
CCDC43-201ENST00000315286 HMX2A2RU54 273 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 H7C4K7 107 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 UPP2O95045 317 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 RTN3O95197 1032 aaPredicted RBP18.78■□□□□ 0.6
CCDC43-201ENST00000315286 HAPLN1P10915 354 aaPredicted RBP18.78■□□□□ 0.6
CCDC43-201ENST00000315286 NRG1Q02297 640 aaPredicted RBP18.78■□□□□ 0.6
CCDC43-201ENST00000315286 CRYMQ14894 314 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 CES3Q6UWW8 571 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 ANKS3Q6ZW76 656 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 ATPAF2Q8N5M1 289 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 LZTR1Q8N653 840 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 CCT6BQ92526 530 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 TTC17Q96AE7 1141 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 APOPT1Q96IL0 206 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 NAT9Q9BTE0 207 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 CASS4Q9NQ75 786 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.78■□□□□ 0.6
CCDC43-201ENST00000315286 UBP1Q9NZI7 540 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 MICAL3Q7RTP6 2002 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 MAFKO60675 156 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 CCNB1P14635 433 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 NEK3P51956 506 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 TLE2Q04725 743 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 OTOP3Q7RTS5 596 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 SPATA21Q7Z572 469 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 C10orf67Q8IYJ2 551 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 LRRC43Q8N309 656 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 ZNF276Q8N554 614 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 RTL3Q8N8U3 475 aaKnown RBP18.78■□□□□ 0.6
CCDC43-201ENST00000315286 LRRC8CQ8TDW0 803 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 SPATA17Q96L03 361 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 SLCO1B3Q9NPD5 702 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 CLIC5Q9NZA1 410 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 SLC17A6Q9P2U8 582 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 VANGL2Q9ULK5 521 aa18.78■□□□□ 0.6
CCDC43-201ENST00000315286 NYNRINQ9P2P1 1898 aaKnown RBP18.78■□□□□ 0.6
CCDC43-201ENST00000315286 DOCK4Q8N1I0 1966 aa18.77■□□□□ 0.6
CCDC43-201ENST00000315286 WDR91A4D1P6 747 aa18.77■□□□□ 0.6
CCDC43-201ENST00000315286 CCT8L1PA6NM43 557 aa18.77■□□□□ 0.6
CCDC43-201ENST00000315286 ERI2A8K979 691 aaKnown RBP18.77■□□□□ 0.6
CCDC43-201ENST00000315286 RFPL1O75677 317 aa18.77■□□□□ 0.6
CCDC43-201ENST00000315286 KRT38O76015 456 aa18.77■□□□□ 0.6
CCDC43-201ENST00000315286 SLC2A3P11169 496 aa18.77■□□□□ 0.6
CCDC43-201ENST00000315286 SPRED3Q2MJR0 410 aa18.77■□□□□ 0.6
CCDC43-201ENST00000315286 MROH9Q5TGP6 573 aa18.77■□□□□ 0.6
CCDC43-201ENST00000315286 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.77■□□□□ 0.6
CCDC43-201ENST00000315286 DNAAF3Q8N9W5 541 aa18.77■□□□□ 0.6
CCDC43-201ENST00000315286 GIPC2Q8TF65 315 aa18.77■□□□□ 0.6
CCDC43-201ENST00000315286 ZNF419Q96HQ0 510 aaPredicted RBP18.77■□□□□ 0.6
CCDC43-201ENST00000315286 APOL2Q9BQE5 337 aa18.77■□□□□ 0.6
CCDC43-201ENST00000315286 TLR8Q9NR97 1041 aaKnown RBP18.77■□□□□ 0.6
CCDC43-201ENST00000315286 CDY1Q9Y6F8 540 aa18.77■□□□□ 0.6
CCDC43-201ENST00000315286 ADAM12O43184 909 aa18.77■□□□□ 0.59
CCDC43-201ENST00000315286 LIG3P49916 1009 aa18.77■□□□□ 0.59
CCDC43-201ENST00000315286 MNX1P50219 401 aaPredicted RBP18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms