RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 IGKV6-21A0A0C4DH24 114 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 CCNB1P14635 433 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 HMOX2P30519 316 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 ZDHHC14Q8IZN3 488 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 CRYBG2Q8N1P7 616 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 NFKBIZQ9BYH8 718 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 CDYLQ9Y232 598 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 PKP3Q9Y446 797 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 PCDHA11Q9Y5I1 949 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 SUPT3HB4E1H0 165 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 H0YGN5 161 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 TLR5O60602 858 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 SUPT3HO75486 399 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 PIGNO95427 931 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 GLP2RO95838 553 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 COPAP53621 1224 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 POU5F1Q01860 360 aaKnown RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 LBRQ14739 615 aaKnown RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 TNS4Q8IZW8 715 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 CMASQ8NFW8 434 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 CMTM5Q96DZ9 223 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 TBC1D13Q9NVG8 400 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 NFS1Q9Y697 457 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 ANGPT2O15123 496 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 DNAJC8O75937 253 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 APOA4P06727 396 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 ITGA2BP08514 1039 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 F7P08709 466 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 SOX4Q06945 474 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 NOGQ13253 232 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 TEX44Q53QW1 395 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 YTHDF3Q7Z739 585 aaKnown RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 MRPS31Q92665 395 aaKnown RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 FGD4Q96M96 766 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 SYT11Q9BT88 431 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 LRG1P02750 347 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 PYGLP06737 847 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 UBTFL6P0CB48 400 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 OASLQ15646 514 aaKnown RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 PSMD5Q16401 504 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 EML3Q32P44 896 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 INTS6LQ5JSJ4 861 aaKnown RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 NEPROQ6NW34 567 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 TAC4Q86UU9 113 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 RSPH1Q8WYR4 309 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 SLC4A5Q9BY07 1137 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 A8MX80 341 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 TFE3P19532 575 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 KCNJ2P63252 427 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 CCDC142Q17RM4 750 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 GALNT4Q8N4A0 578 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 NIPA2Q8N8Q9 360 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 SLC44A1Q8WWI5 657 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 SDCCAG3Q96C92 435 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 ADGRA2Q96PE1 1338 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 COL2A1P02458 1487 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 CSH1P0DML2 217 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 CSH2P0DML3 217 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 CALB2P22676 271 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 TUFMP49411 452 aaKnown RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 TCEAL1Q15170 157 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 SPATA6LQ8N4H0 392 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 SPATA22Q8NHS9 363 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 SERAC1Q96JX3 654 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 ZMAT2Q96NC0 199 aaKnown RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 APOL5Q9BWW9 433 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 PRDM16Q9HAZ2 1276 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 LMCD1Q9NZU5 365 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 PGAP2Q9UHJ9 254 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 CRLS1Q9UJA2 301 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 ARHGAP26Q9UNA1 814 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 RNF103-CHMP3A0A140T963 221 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 GJA5P36382 358 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 SGO1Q5FBB7 561 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 GDF6Q6KF10 455 aaPredicted RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 DDX53Q86TM3 631 aaKnown RBP6.31□□□□□ -1.4
PRKDC-201ENST00000314191 CNPY4Q8N129 248 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 TBL1YQ9BQ87 522 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 TRIM54Q9BYV2 358 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 OSBPL7Q9BZF2 842 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 EFCAB1Q9HAE3 211 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 PTPRHQ9HD43 1115 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 RABGEF1Q9UJ41 708 aa6.31□□□□□ -1.4
PRKDC-201ENST00000314191 TRIM16O95361 564 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 PLK1P53350 603 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 FITM2Q8N6M3 262 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 TMEM106CQ9BVX2 250 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 GGA2Q9UJY4 613 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 C2orf71A6NGG8 1288 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 CRYMQ14894 314 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 SLC41A1Q8IVJ1 513 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 EXOC2Q96KP1 924 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 CASS4Q9NQ75 786 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 ASMTLO95671 621 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 SLC5A3P53794 718 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 GPX6P59796 221 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 GRB14Q14449 540 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 APBB2Q92870 758 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 CNTN3Q9P232 1028 aa6.3□□□□□ -1.4
PRKDC-201ENST00000314191 ERI2A8K979 691 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms