RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 CCNCP24863 283 aa23.1■■□□□ 1.29
IRF3-201ENST00000309877 MAPKAPK2P49137 400 aa23.1■■□□□ 1.29
IRF3-201ENST00000309877 TEAD2Q15562 447 aa23.1■■□□□ 1.29
IRF3-201ENST00000309877 GRASPQ7Z6J2 395 aaPredicted RBP23.1■■□□□ 1.29
IRF3-201ENST00000309877 ZCCHC9Q8N567 271 aaKnown RBP23.1■■□□□ 1.29
IRF3-201ENST00000309877 TSEN2Q8NCE0 465 aaKnown RBP23.1■■□□□ 1.29
IRF3-201ENST00000309877 ADAMTS19Q8TE59 1207 aa23.1■■□□□ 1.29
IRF3-201ENST00000309877 PPP2R3CQ969Q6 453 aa23.1■■□□□ 1.29
IRF3-201ENST00000309877 TSGA13Q96PP4 275 aa23.1■■□□□ 1.29
IRF3-201ENST00000309877 RETREG1Q9H6L5 497 aa23.1■■□□□ 1.29
IRF3-201ENST00000309877 VIPAS39Q9H9C1 493 aa23.1■■□□□ 1.29
IRF3-201ENST00000309877 SH3BP1Q9Y3L3 701 aa23.1■■□□□ 1.29
IRF3-201ENST00000309877 ZFP37Q9Y6Q3 630 aaPredicted RBP23.1■■□□□ 1.29
IRF3-201ENST00000309877 ARHGAP42A6NI28 874 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 RFXAPO00287 272 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 ZNF197O14709 1029 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 OR1E1P30953 314 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 CHKAP35790 457 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 AVPR1AP37288 418 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 PAPOLAP51003 745 aaKnown RBP23.09■■□□□ 1.29
IRF3-201ENST00000309877 ZXDBP98169 803 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 WASHC5Q12768 1159 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 CEP128Q6ZU80 1094 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 NAT8LQ8N9F0 302 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 PRCCQ92733 491 aaPredicted RBP23.09■■□□□ 1.29
IRF3-201ENST00000309877 ZNF707Q96C28 371 aaPredicted RBP23.09■■□□□ 1.29
IRF3-201ENST00000309877 MRPL38Q96DV4 380 aaKnown RBP23.09■■□□□ 1.29
IRF3-201ENST00000309877 CDCA3Q99618 268 aaPredicted RBP23.09■■□□□ 1.29
IRF3-201ENST00000309877 CEP41Q9BYV8 373 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 ACBD3Q9H3P7 528 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 TASP1Q9H6P5 420 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 CFAP97Q9P2B7 532 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 KLHL8Q9P2G9 620 aaPredicted RBP23.09■■□□□ 1.29
IRF3-201ENST00000309877 STOML2Q9UJZ1 356 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 HPCAL4Q9UM19 191 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 ZNF510Q9Y2H8 683 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 CEP290O15078 2479 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 TSPAN3O60637 253 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 PTPN3P26045 913 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 PMS2P54278 862 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 CDH4P55283 916 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 NTHL1P78549 312 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 ANKRD22Q5VYY1 191 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 Q6ZNB5 142 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 ARHGAP36Q6ZRI8 547 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 PID1Q7Z2X4 250 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 ZNF567Q8N184 647 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 UBLCP1Q8WVY7 318 aaPredicted RBP23.09■■□□□ 1.29
IRF3-201ENST00000309877 NOL6Q9H6R4 1146 aaKnown RBP23.09■■□□□ 1.29
IRF3-201ENST00000309877 ETNK1Q9HBU6 452 aa23.09■■□□□ 1.29
IRF3-201ENST00000309877 SOBPA7XYQ1 873 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 RASA4BC9J798 803 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 SCAMP3O14828 347 aaKnown RBP23.08■■□□□ 1.29
IRF3-201ENST00000309877 CHADO15335 359 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 RASA4O43374 803 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 RAMP2O60895 175 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 MOSPD3O75425 235 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 FDFT1P37268 417 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 RPS24P62847 133 aaKnown RBP23.08■■□□□ 1.29
IRF3-201ENST00000309877 SLC5A9Q2M3M2 681 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 FAXCQ5TGI0 409 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 TIGD7Q6NT04 549 aaPredicted RBP23.08■■□□□ 1.29
IRF3-201ENST00000309877 ZNF354CQ86Y25 554 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 CMTM8Q8IZV2 173 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 C12orf76Q8N812 135 aaPredicted RBP23.08■■□□□ 1.29
IRF3-201ENST00000309877 SMG7Q92540 1137 aaKnown RBP23.08■■□□□ 1.29
IRF3-201ENST00000309877 PRICKLE1Q96MT3 831 aaPredicted RBP23.08■■□□□ 1.29
IRF3-201ENST00000309877 PWWP2AQ96N64 755 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 VAT1Q99536 393 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 TXLNGYQ9BZA5 131 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 ZNF212Q9UDV6 495 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 ARHGAP26Q9UNA1 814 aa23.08■■□□□ 1.29
IRF3-201ENST00000309877 OBSL1O75147 1896 aa23.08■■□□□ 1.28
IRF3-201ENST00000309877 GOLGA8MH3BSY2 632 aa23.07■■□□□ 1.28
IRF3-201ENST00000309877 GREM1O60565 184 aa23.07■■□□□ 1.28
IRF3-201ENST00000309877 CLDN11O75508 207 aa23.07■■□□□ 1.28
IRF3-201ENST00000309877 METTL18O95568 372 aa23.07■■□□□ 1.28
IRF3-201ENST00000309877 HSD17B3P37058 310 aa23.07■■□□□ 1.28
IRF3-201ENST00000309877 YBEYP58557 167 aaPredicted RBP23.07■■□□□ 1.28
IRF3-201ENST00000309877 POLD3Q15054 466 aaPredicted RBP23.07■■□□□ 1.28
IRF3-201ENST00000309877 CFAP58Q5T655 872 aa23.07■■□□□ 1.28
IRF3-201ENST00000309877 TTC39BQ5VTQ0 682 aaPredicted RBP23.07■■□□□ 1.28
IRF3-201ENST00000309877 HTR3DQ70Z44 454 aa23.07■■□□□ 1.28
IRF3-201ENST00000309877 HMCESQ96FZ2 354 aa23.07■■□□□ 1.28
IRF3-201ENST00000309877 IGFLR1Q9H665 355 aa23.07■■□□□ 1.28
IRF3-201ENST00000309877 DNAJC17Q9NVM6 304 aaKnown RBP23.07■■□□□ 1.28
IRF3-201ENST00000309877 IPO11Q9UI26 975 aaKnown RBP23.07■■□□□ 1.28
IRF3-201ENST00000309877 TRHDEQ9UKU6 1024 aa23.07■■□□□ 1.28
IRF3-201ENST00000309877 TCRBV7S3A2A0A539 114 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 E7EVH7 732 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 LEFTY2O00292 366 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 MATN3O15232 486 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 MAFKO60675 156 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 JCHAINP01591 159 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 KCNJ11Q14654 390 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 PARP6Q2NL67 630 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 PARP15Q460N3 678 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 TEX44Q53QW1 395 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 PRSS36Q5K4E3 855 aa23.06■■□□□ 1.28
IRF3-201ENST00000309877 ALS2CLQ60I27 953 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms