RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 GOLGA6L7A0A1B0GV03 622 aa23.01■■□□□ 1.27
PDLIM2-202ENST00000308354 SLC12A8A0AV02 714 aa23.01■■□□□ 1.27
PDLIM2-202ENST00000308354 KRT4P19013 534 aa23.01■■□□□ 1.27
PDLIM2-202ENST00000308354 RFC2P35250 354 aa23.01■■□□□ 1.27
PDLIM2-202ENST00000308354 ARHGAP12Q8IWW6 846 aa23.01■■□□□ 1.27
PDLIM2-202ENST00000308354 TMEM169Q96HH4 297 aa23.01■■□□□ 1.27
PDLIM2-202ENST00000308354 ZNF558Q96NG5 402 aa23.01■■□□□ 1.27
PDLIM2-202ENST00000308354 GORASP1Q9BQQ3 440 aa23.01■■□□□ 1.27
PDLIM2-202ENST00000308354 ASMTLO95671 621 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 CPP00450 1065 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 JCHAINP01591 159 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 CA4P22748 312 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 DNAJB2P25686 324 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 FOXN2P32314 431 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 CD68P34810 354 aaPredicted RBP23■■□□□ 1.27
PDLIM2-202ENST00000308354 SESN2P58004 480 aaPredicted RBP23■■□□□ 1.27
PDLIM2-202ENST00000308354 MZB1Q8WU39 189 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 OXCT2Q9BYC2 517 aaPredicted RBP23■■□□□ 1.27
PDLIM2-202ENST00000308354 SLC39A8Q9C0K1 460 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 CATSPERBQ9H7T0 1116 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 SMG5Q9UPR3 1016 aaKnown RBP23■■□□□ 1.27
PDLIM2-202ENST00000308354 BACE2Q9Y5Z0 518 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 TYROBPO43914 113 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 SNX3O60493 162 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 TLR5O60602 858 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 USP12O75317 370 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 SOD2P04179 222 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 HOXC13P31276 330 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 IL9RQ01113 521 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 MS4A13Q5J8X5 152 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 TFAP2DQ7Z6R9 452 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 SLC39A11Q8N1S5 342 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 MICALL1Q8N3F8 863 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 RC3H2Q9HBD1 1191 aaKnown RBP23■■□□□ 1.27
PDLIM2-202ENST00000308354 IGSF9Q9P2J2 1179 aa23■■□□□ 1.27
PDLIM2-202ENST00000308354 GREB1Q4ZG55 1949 aa22.99■■□□□ 1.27
PDLIM2-202ENST00000308354 APOEP02649 317 aa22.99■■□□□ 1.27
PDLIM2-202ENST00000308354 PSEN1P49768 467 aa22.99■■□□□ 1.27
PDLIM2-202ENST00000308354 ITIH4Q14624 930 aa22.99■■□□□ 1.27
PDLIM2-202ENST00000308354 ANKLE1Q8NAG6 615 aa22.99■■□□□ 1.27
PDLIM2-202ENST00000308354 PPM1EQ8WY54 764 aa22.99■■□□□ 1.27
PDLIM2-202ENST00000308354 XAB2Q9HCS7 855 aaKnown RBP22.99■■□□□ 1.27
PDLIM2-202ENST00000308354 FGF10O15520 208 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 OAS1P00973 400 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 SLC2A3P11169 496 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 TAC1P20366 129 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 LBX1P52954 281 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 SLC18A1P54219 525 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 CBLBQ13191 982 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 TEX44Q53QW1 395 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 CASC4Q6P4E1 433 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 UNC5AQ6ZN44 842 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 CYP4F11Q9HBI6 524 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 UBP1Q9NZI7 540 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 GRID1Q9ULK0 1009 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 TTLL3Q9Y4R7 772 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 SPAG6O75602 509 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 NFKB1P19838 968 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 SARNPP82979 210 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 TRIP4Q15650 581 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 SLC1A5Q15758 541 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 RAP1GAP2Q684P5 730 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 ATPAF2Q8N5M1 289 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 ZSCAN18Q8TBC5 510 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 CCT6BQ92526 530 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 ZNF512Q96ME7 567 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 EBNA1BP2Q99848 306 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 BRD8Q9H0E9 1235 aa22.98■■□□□ 1.27
PDLIM2-202ENST00000308354 GOLGA8RI6L899 631 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 CNTN5O94779 1100 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 ZDHHC11BP0C7U3 371 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 HSPA8P11142 646 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 MGAT1P26572 445 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 TUFMP49411 452 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 ALFQ53S48 1182 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 ZNF461Q8TAF7 563 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 SLC44A1Q8WWI5 657 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 DPF3Q92784 378 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 ZNF419Q96HQ0 510 aaPredicted RBP22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 C1orf74Q96LT6 269 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 KLF6Q99612 283 aaPredicted RBP22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 OLA1Q9NTK5 396 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 CXorf49A8MYA2 514 aaPredicted RBP22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 FAM155BO75949 473 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 NUMBP49757 651 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 KCNQ1P51787 676 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 TRMT10BQ6PF06 316 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 NECAB2Q7Z6G3 386 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 CTAGE3PQ8IX95 158 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 CNTD1Q8N815 330 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 RTL3Q8N8U3 475 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 AFF4Q9UHB7 1163 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 IKBKGQ9Y6K9 419 aa22.97■■□□□ 1.27
PDLIM2-202ENST00000308354 CCT8L1PA6NM43 557 aa22.96■■□□□ 1.27
PDLIM2-202ENST00000308354 C1QAP02745 245 aa22.96■■□□□ 1.27
PDLIM2-202ENST00000308354 CDK16Q00536 496 aa22.96■■□□□ 1.27
PDLIM2-202ENST00000308354 DSG1Q02413 1049 aa22.96■■□□□ 1.27
PDLIM2-202ENST00000308354 LRRC8BQ6P9F7 803 aa22.96■■□□□ 1.27
PDLIM2-202ENST00000308354 OTOP3Q7RTS5 596 aa22.96■■□□□ 1.27
PDLIM2-202ENST00000308354 OR52K1Q8NGK4 314 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms