RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 RAP2CQ9Y3L5 183 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 NUP98P52948 1817 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 MYOCOSA0A1B0GUC4 107 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 HBP1O60381 514 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 F7P08709 466 aaPredicted RBP13.73□□□□□ -0.21
SEC23A-201ENST00000307712 FGFR1P11362 822 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 ACAT1P24752 427 aaKnown RBP13.73□□□□□ -0.21
SEC23A-201ENST00000307712 FASP25445 335 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 TRAF2Q12933 501 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 DEFB106AQ8N104 65 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 TMCO5AQ8N6Q1 288 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 RNF139Q8WU17 664 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 SARS2Q9NP81 518 aaKnown RBP13.73□□□□□ -0.21
SEC23A-201ENST00000307712 STK39Q9UEW8 545 aa13.73□□□□□ -0.21
SEC23A-201ENST00000307712 ROBO1Q9Y6N7 1651 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 PSMD12O00232 456 aaPredicted RBP13.72□□□□□ -0.21
SEC23A-201ENST00000307712 AMHP03971 560 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 ITGAXP20702 1163 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 CMPK2Q5EBM0 449 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 MTX3Q5HYI7 312 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 ATPAF2Q8N5M1 289 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 SLC4A11Q8NBS3 891 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 AZIN2Q96A70 460 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 ATXN3LQ9H3M9 355 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 POPDC2Q9HBU9 364 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 ATP6AP2A0A1C7CYW4 349 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 TRIM38O00635 465 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 ATP6AP2O75787 350 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 HNRNPLP14866 589 aaKnown RBP eCLIP13.72□□□□□ -0.219e-7■□□□□ 11.3
SEC23A-201ENST00000307712 ATICP31939 592 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 RALGDSQ12967 914 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 AGAP9Q5VTM2 703 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 KLHDC10Q6PID8 442 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 CMASQ8NFW8 434 aaPredicted RBP13.72□□□□□ -0.21
SEC23A-201ENST00000307712 PCDH19Q8TAB3 1148 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 ACTRT2Q8TDY3 377 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 ZNF670Q9BS34 389 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 NACA2Q9H009 215 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 PLGRKTQ9HBL7 147 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 MRGBPQ9NV56 204 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 DNAAF2Q9NVR5 837 aaKnown RBP13.72□□□□□ -0.21
SEC23A-201ENST00000307712 TDRKHQ9Y2W6 561 aaKnown RBP13.72□□□□□ -0.21
SEC23A-201ENST00000307712 M0R3G1 203 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 AOC1P19801 751 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 NFKBIAP25963 317 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 LRPAP1P30533 357 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 DLG2Q15700 870 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 GATA5Q9BWX5 397 aaPredicted RBP13.72□□□□□ -0.21
SEC23A-201ENST00000307712 ELOVL4Q9GZR5 314 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 NOL11Q9H8H0 719 aaKnown RBP13.72□□□□□ -0.21
SEC23A-201ENST00000307712 POLR1BQ9H9Y6 1135 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 PTPRHQ9HD43 1115 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 ADAMTS6Q9UKP5 1117 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 RAB26Q9ULW5 256 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 PCDHGC3Q9UN70 934 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 C10orf71Q711Q0 1435 aa13.72□□□□□ -0.21
SEC23A-201ENST00000307712 MTSS1O43312 755 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 NPM3O75607 178 aaKnown RBP13.71□□□□□ -0.21
SEC23A-201ENST00000307712 XRCC1P18887 633 aaPredicted RBP13.71□□□□□ -0.21
SEC23A-201ENST00000307712 BCAT1P54687 386 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 SAMD4BQ5PRF9 694 aaKnown RBP13.71□□□□□ -0.21
SEC23A-201ENST00000307712 GPR107Q5VW38 600 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 TWF2Q6IBS0 349 aaKnown RBP13.71□□□□□ -0.21
SEC23A-201ENST00000307712 ABHD15Q6UXT9 468 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 ANKLE1Q8NAG6 615 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 ZNF560Q96MR9 790 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 STRA6Q9BX79 667 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 CDT1Q9H211 546 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 DNAJC28Q9NX36 388 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 FZD1Q9UP38 647 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 TTLL13PA6NNM8 815 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 C16orf96A6NNT2 1141 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 H3BSA7 217 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 GAS2O43903 313 aaKnown RBP13.71□□□□□ -0.21
SEC23A-201ENST00000307712 BCL10O95999 233 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 PTPN7P35236 360 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 NUMBP49757 651 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 THOP1P52888 689 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 SLC9B1Q4ZJI4 515 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 TMEM198Q66K66 360 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 GK5Q6ZS86 529 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 DPP9Q86TI2 863 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 ZNF408Q9H9D4 720 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 AP3B1O00203 1094 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 TIPRLO75663 272 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 PGK2P07205 417 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 TSPAN8P19075 237 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 TFEBP19484 476 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 NAB1Q13506 487 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 KCNJ11Q14654 390 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 KYAT1Q16773 422 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 CA9Q16790 459 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 ARL13AQ5H913 290 aaPredicted RBP13.71□□□□□ -0.21
SEC23A-201ENST00000307712 NBPF12Q5TAG4 269 aaPredicted RBP13.71□□□□□ -0.21
SEC23A-201ENST00000307712 UBR7Q8N806 425 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 TNIP2Q8NFZ5 429 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 P2RY11Q96G91 374 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 SIRPGQ9P1W8 387 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 ASB3Q9Y575 518 aa13.71□□□□□ -0.21
SEC23A-201ENST00000307712 A0A088AWK7 358 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms