RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 RBL1P28749 1068 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 AQP1P29972 269 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 SLC11A2P49281 568 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 RABGGTBP53611 331 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 CASP9P55211 416 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 CCL15Q16663 113 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 CNSTQ6PJW8 725 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 GALNTL5Q7Z4T8 443 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 BRSK2Q8IWQ3 736 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 AKT1S1Q96B36 256 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 FAR2Q96K12 515 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 BBS4Q96RK4 519 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 ADI1Q9BV57 179 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 ZNF446Q9NWS9 450 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 KLQ9UEF7 1012 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 ZNHIT2Q9UHR6 403 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 CLASP1Q7Z460 1538 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 ACADSBP45954 432 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 GALK1P51570 392 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 PSMD7P51665 324 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 MAXP61244 160 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 ITGB3BPQ13352 177 aaPredicted RBP12.86□□□□□ -0.35
USP38-201ENST00000307017 FBXO10Q9UK96 956 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 TSPAN16Q9UKR8 245 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 COQ6Q9Y2Z9 468 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.86□□□□□ -0.35
USP38-201ENST00000307017 KPNA4O00629 521 aaPredicted RBP12.86□□□□□ -0.35
USP38-201ENST00000307017 TPST2O60704 377 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 OR6A2O95222 327 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 MYL12AP19105 171 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 TUBP50607 506 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 C6orf52Q5T4I8 152 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 STX12Q86Y82 276 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 FBXO39Q8N4B4 442 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 TERB1Q8NA31 727 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 OR52K1Q8NGK4 314 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 KRT35Q92764 455 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 QKIQ96PU8 341 aaKnown RBP eCLIP12.86□□□□□ -0.35
USP38-201ENST00000307017 CRISPLD1Q9H336 500 aa12.86□□□□□ -0.35
USP38-201ENST00000307017 PSMG1O95456 288 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 HNRNPLP14866 589 aaKnown RBP eCLIP12.85□□□□□ -0.35
USP38-201ENST00000307017 PTDSS1P48651 473 aaKnown RBP12.85□□□□□ -0.35
USP38-201ENST00000307017 GMPSP49915 693 aaPredicted RBP12.85□□□□□ -0.35
USP38-201ENST00000307017 TSNQ15631 228 aaKnown RBP12.85□□□□□ -0.35
USP38-201ENST00000307017 ZNF613Q6PF04 617 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 KRT74Q7RTS7 529 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 FAM126BQ8IXS8 530 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 OR6K2Q8NGY2 324 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 KAT5Q92993 513 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 TMEM176AQ96HP8 235 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 UCKL1Q9NWZ5 548 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 ERAP1Q9NZ08 941 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 AAR2Q9Y312 384 aaKnown RBP12.85□□□□□ -0.35
USP38-201ENST00000307017 IFI30P13284 250 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 TYMPP19971 482 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 MYOZ2Q9NPC6 264 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 ETAA1Q9NY74 926 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 ACOT9Q9Y305 439 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 F8VP50 259 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 RPA1P27694 616 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 LGALS3BPQ08380 585 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 RUBCNQ92622 972 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 DMRTB1Q96MA1 342 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 MROH8Q9H579 483 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 TLR8Q9NR97 1041 aaKnown RBP12.85□□□□□ -0.35
USP38-201ENST00000307017 KCNH4Q9UQ05 1017 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 NCAPD2Q15021 1401 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 SMIM22K7EJ46 135 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 PLD1Q13393 1074 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 ARHGAP36Q6ZRI8 547 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 C17orf75Q9HAS0 396 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 L1RE1Q9UN81 338 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 EIF3DO15371 548 aaKnown RBP eCLIP12.85□□□□□ -0.35
USP38-201ENST00000307017 ACADMP11310 421 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 COX7A2P14406 83 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 CTPS1P17812 591 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 CDC73Q6P1J9 531 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 SLC26A11Q86WA9 606 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 FAM20CQ8IXL6 584 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 NAT16Q8N8M0 369 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 KAT2AQ92830 837 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 TBL1YQ9BQ87 522 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 NKIRAS2Q9NYR9 191 aa12.85□□□□□ -0.35
USP38-201ENST00000307017 MARSP56192 900 aaKnown RBP12.84□□□□□ -0.35
USP38-201ENST00000307017 PDIA6Q15084 440 aa12.84□□□□□ -0.35
USP38-201ENST00000307017 PARGQ86W56 976 aa12.84□□□□□ -0.35
USP38-201ENST00000307017 METTL6Q8TCB7 284 aa12.84□□□□□ -0.35
USP38-201ENST00000307017 NDRG1Q92597 394 aaKnown RBP12.84□□□□□ -0.35
USP38-201ENST00000307017 ISCA1Q9BUE6 129 aa12.84□□□□□ -0.35
USP38-201ENST00000307017 IKZF4Q9H2S9 585 aa12.84□□□□□ -0.35
USP38-201ENST00000307017 TPK1Q9H3S4 243 aa12.84□□□□□ -0.35
USP38-201ENST00000307017 ZNF180Q9UJW8 692 aa12.84□□□□□ -0.35
USP38-201ENST00000307017 STON1Q9Y6Q2 735 aa12.84□□□□□ -0.35
USP38-201ENST00000307017 CDK12Q9NYV4 1490 aaPredicted RBP12.84□□□□□ -0.35
USP38-201ENST00000307017 PIGNO95427 931 aa12.84□□□□□ -0.35
USP38-201ENST00000307017 FGRP09769 529 aa12.84□□□□□ -0.35
USP38-201ENST00000307017 EFNA1P20827 205 aaPredicted RBP12.84□□□□□ -0.35
USP38-201ENST00000307017 PAICSP22234 425 aaKnown RBP12.84□□□□□ -0.35
USP38-201ENST00000307017 BDNFP23560 247 aa12.84□□□□□ -0.35
USP38-201ENST00000307017 KIAA0408Q6ZU52 694 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms