RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 LCA5LO95447 670 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 APBB3O95704 486 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 DLDP09622 509 aaKnown RBP11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SP9P0CG40 484 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 RHOQP17081 205 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 MAN1A1P33908 653 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 GJC1P36383 396 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ETFBP38117 255 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ARL4AP40617 200 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ARHGAP25P42331 645 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 IL12RB1P42701 662 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 MAPKAPK2P49137 400 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ZNF135P52742 658 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 KRT83P78385 493 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TCF15Q12870 199 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 MESDQ14696 234 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 CRY1Q16526 586 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SMTNL2Q2TAL5 461 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 BOLA3Q53S33 107 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PPP6R3Q5H9R7 873 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ZFYVE27Q5T4F4 411 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 MANEALQ5VSG8 457 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 DAB2IPQ5VWQ8 1189 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TMEM215Q68D42 235 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 CXorf57Q6NSI4 855 aaKnown RBP11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TSSK4Q6SA08 328 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ZNF783Q6ZMS7 281 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 KIAA1328Q86T90 577 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ADIPOR2Q86V24 386 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ZNF354CQ86Y25 554 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ZNF683Q8IZ20 524 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PYROXD2Q8N2H3 581 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PGBD3Q8N328 593 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SORCS1Q8WY21 1168 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PEBP4Q96S96 227 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 C2orf49Q9BVC5 232 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TMEM248Q9NWD8 314 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 GPATCH2LQ9NWQ4 482 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TBC1D30Q9Y2I9 924 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 STON1Q9Y6Q2 735 aa11.3□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SPAG17Q6Q759 2223 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ILVBLA1L0T0 632 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ANTXRLA6NF34 631 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 FAM72CH0Y354 149 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 H3BRJ5 948 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 K7ESF4 209 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ADAM23O75077 832 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 EPHX1P07099 455 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SRPRAP08240 638 aaKnown RBP11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 MZF1P28698 734 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 HOXC13P31276 330 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 MRE11P49959 708 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 NAP1L1P55209 391 aaKnown RBP11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ECT2LQ008S8 904 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 KRT81Q14533 505 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ODF2Q5BJF6 829 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 FAM72AQ5TYM5 149 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 HEATR6Q6AI08 1181 aaKnown RBP11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 IL31Q6EBC2 164 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ANO7Q6IWH7 933 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 FAM72DQ6L9T8 149 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 RAD9BQ6WBX8 426 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 LONP2Q86WA8 852 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 FAM72BQ86X60 149 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 MAML2Q8IZL2 1156 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 APCDD1Q8J025 514 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ARFGAP1Q8N6T3 406 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 DCAF4L2Q8NA75 395 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TEKT4Q8WW24 435 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ATRIPQ8WXE1 791 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TTC17Q96AE7 1141 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 LMLNQ96KR4 655 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 KCTD15Q96SI1 283 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ACOX2Q99424 681 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 GABRG3Q99928 467 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ZSCAN32Q9NX65 697 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 DNAI1Q9UI46 699 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 INTS6Q9UL03 887 aaKnown RBP11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 HPCAL4Q9UM19 191 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 ARIH1Q9Y4X5 557 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PCDHGA2Q9Y5H1 932 aa11.29□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 A0A0A6YYK5 440 aaPredicted RBP11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 AXIN1O15169 862 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SPOPO43791 374 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 RAMP2O60895 175 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 MTA2O94776 668 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 KRT7P08729 469 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PRKCHP24723 683 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 IL1R2P27930 398 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 FNTBP49356 437 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 NUMBP49757 651 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 VAV2P52735 878 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 PLK1P53350 603 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SLC25A11Q02978 314 aaKnown RBP11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 GNA12Q03113 381 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 SEMA3BQ13214 749 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 KCNT1Q5JUK3 1230 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 TMEM92Q6UXU6 159 aa11.28□□□□□ -0.6
CSPG4P2Y-201ENST00000306853 RFX8Q6ZV50 586 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms