RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 PARNO95453 639 aaKnown RBP14.91□□□□□ -0.02
PTPN9-201ENST00000306726 FAM200BP0CF97 657 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 FUT11Q495W5 492 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 CAND1Q86VP6 1230 aaKnown RBP14.91□□□□□ -0.02
PTPN9-201ENST00000306726 SLC7A14Q8TBB6 771 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 SLC45A3Q96JT2 553 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 PCDH18Q9HCL0 1135 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 M0QYT0 321 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 RFPL1O75677 317 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 CLIC3O95833 236 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 JCHAINP01591 159 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 HOXC6P09630 235 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 EDNRBP24530 442 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 VEGFBP49765 207 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 ARHGAP17Q68EM7 881 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 CATSPER4Q7RTX7 472 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 ZNF786Q8N393 782 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 SLC4A11Q8NBS3 891 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 C18orf25Q96B23 403 aaPredicted RBP14.91□□□□□ -0.02
PTPN9-201ENST00000306726 CMTM5Q96DZ9 223 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 FBXL18Q96ME1 805 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 CPA4Q9UI42 421 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 FARP1Q9Y4F1 1045 aaPredicted RBP14.91□□□□□ -0.02
PTPN9-201ENST00000306726 TGFB3P10600 412 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 XRCC1P18887 633 aaPredicted RBP14.91□□□□□ -0.02
PTPN9-201ENST00000306726 EIF4BP23588 611 aaKnown RBP14.91□□□□□ -0.02
PTPN9-201ENST00000306726 ICAM3P32942 547 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 GARSP41250 739 aaKnown RBP14.91□□□□□ -0.02
PTPN9-201ENST00000306726 ACTR3P61158 418 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 GRM1Q13255 1194 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 WDR49Q8IV35 697 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 CYGBQ8WWM9 190 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 MRPL45Q9BRJ2 306 aaKnown RBP14.91□□□□□ -0.02
PTPN9-201ENST00000306726 CDT1Q9H211 546 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 CXCL16Q9H2A7 254 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 VTA1Q9NP79 307 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 TEX264Q9Y6I9 313 aa14.91□□□□□ -0.02
PTPN9-201ENST00000306726 MAGEB2O15479 319 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 RTN3O95197 1032 aaPredicted RBP14.9□□□□□ -0.02
PTPN9-201ENST00000306726 ITGA2BP08514 1039 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 TFPTP0C1Z6 253 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 COX4I1P13073 169 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 TPD52P55327 224 aaPredicted RBP14.9□□□□□ -0.02
PTPN9-201ENST00000306726 DPP9Q86TI2 863 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 LDB1Q86U70 411 aaPredicted RBP14.9□□□□□ -0.02
PTPN9-201ENST00000306726 SNX25Q9H3E2 840 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 SNTG2Q9NY99 539 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 MAP2K5Q13163 448 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 RARS2Q5T160 578 aaKnown RBP14.9□□□□□ -0.02
PTPN9-201ENST00000306726 SLC9A4Q6AI14 798 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 ITPRIPL1Q6GPH6 555 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 PQLC3Q8N755 202 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 ENDOVQ8N8Q3 282 aaKnown RBP14.9□□□□□ -0.02
PTPN9-201ENST00000306726 OR6P1Q8NGX9 317 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 CIB1Q99828 191 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 EBNA1BP2Q99848 306 aaKnown RBP14.9□□□□□ -0.02
PTPN9-201ENST00000306726 SPATA16Q9BXB7 569 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 MRPL46Q9H2W6 279 aaKnown RBP14.9□□□□□ -0.02
PTPN9-201ENST00000306726 PRDM12Q9H4Q4 367 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 CHRAC1Q9NRG0 131 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 DPP3Q9NY33 737 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 BFARQ9NZS9 450 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 EGFL7Q9UHF1 273 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 AP4B1Q9Y6B7 739 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 PLXNB2O15031 1838 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 TNPO2O14787 897 aaKnown RBP14.9□□□□□ -0.02
PTPN9-201ENST00000306726 HNRNPCL1O60812 293 aaKnown RBP14.9□□□□□ -0.02
PTPN9-201ENST00000306726 ASPAP45381 313 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 IDH3AP50213 366 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 C1QTNF8P60827 252 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 PDAP1Q13442 181 aaKnown RBP14.9□□□□□ -0.02
PTPN9-201ENST00000306726 NOMO1Q15155 1222 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 CCDC14Q49A88 953 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 B3GNT9Q6UX72 402 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 TDRPQ86YL5 185 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 PDZD8Q8NEN9 1154 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 HASPINQ8TF76 798 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 KCTD4Q8WVF5 259 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 TFB1MQ8WVM0 346 aaKnown RBP14.9□□□□□ -0.02
PTPN9-201ENST00000306726 NRDE2Q9H7Z3 1164 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 POPDC2Q9HBU9 364 aa14.9□□□□□ -0.02
PTPN9-201ENST00000306726 NFASCO94856 1347 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 SDR42E2A6NKP2 422 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 ADCY6O43306 1168 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 STILQ15468 1287 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 GK5Q6ZS86 529 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 NET1Q7Z628 596 aaPredicted RBP14.89□□□□□ -0.03
PTPN9-201ENST00000306726 ACO2Q99798 780 aaKnown RBP14.89□□□□□ -0.03
PTPN9-201ENST00000306726 EURLQ9NYK6 297 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 E7ENQ6 273 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 H3BSA7 217 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 KLHL2O95198 593 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 NDUFV1P49821 464 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 SLC10A2Q12908 348 aaPredicted RBP14.89□□□□□ -0.03
PTPN9-201ENST00000306726 C16orf72Q14CZ0 275 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 ZNF792Q3KQV3 632 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 MTX3Q5HYI7 312 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 MPZL3Q6UWV2 235 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 MAMDC4Q6UXC1 1216 aa14.89□□□□□ -0.03
PTPN9-201ENST00000306726 TRIM67Q6ZTA4 783 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms