RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CROTQ9UKG9 612 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 A0A0U1RQJ8 604 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 ENO4A6NNW6 628 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 TGFB1I1O43294 461 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 CYP2A6P11509 494 aaPredicted RBP16.23■□□□□ 0.19
USP42-201ENST00000306177 PSMB4P28070 264 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 ATP5C1P36542 298 aaKnown RBP16.23■□□□□ 0.19
USP42-201ENST00000306177 ALDH6A1Q02252 535 aaKnown RBP16.23■□□□□ 0.19
USP42-201ENST00000306177 ARSHQ5FYA8 562 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 PCID2Q5JVF3 399 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 GJC2Q5T442 439 aaPredicted RBP16.23■□□□□ 0.19
USP42-201ENST00000306177 ARMC12Q5T9G4 340 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 NPNTQ6UXI9 565 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 TRMT11Q7Z4G4 463 aaKnown RBP16.23■□□□□ 0.19
USP42-201ENST00000306177 GPR141Q7Z602 305 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 OR5B17Q8NGF7 314 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 SPATA20Q8TB22 786 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 TSEN34Q9BSV6 310 aaKnown RBP16.23■□□□□ 0.19
USP42-201ENST00000306177 COMMD8Q9NX08 183 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 CACNA2D2Q9NY47 1150 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 NUDT5Q9UKK9 219 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 NDUFAF1Q9Y375 327 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 CARNS1A5YM72 827 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 XYLBO75191 536 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 VPS4BO75351 444 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 KATNA1O75449 491 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 PAX3P23760 479 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 PRKCQQ04759 706 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 UBE3AQ05086 875 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 ZBTB49Q6ZSB9 765 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 PIGZQ86VD9 579 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 C11orf74Q86VG3 221 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 INPP4AQ96PE3 977 aaPredicted RBP16.23■□□□□ 0.19
USP42-201ENST00000306177 RNF157Q96PX1 679 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 AHSPQ9NZD4 102 aa16.23■□□□□ 0.19
USP42-201ENST00000306177 MSCO60682 206 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 ETS1P14921 441 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 MARSP56192 900 aaKnown RBP16.22■□□□□ 0.19
USP42-201ENST00000306177 MAP2K5Q13163 448 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 FASTKQ14296 549 aaKnown RBP16.22■□□□□ 0.19
USP42-201ENST00000306177 FNDC5Q8NAU1 212 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 PADI4Q9UM07 663 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 IFT172Q9UG01 1749 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 RASSF9O75901 435 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 ATP6V1G2O95670 118 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 BOP1Q14137 746 aaKnown RBP16.22■□□□□ 0.19
USP42-201ENST00000306177 PABPC1LQ4VXU2 614 aaKnown RBP16.22■□□□□ 0.19
USP42-201ENST00000306177 RIPOR1Q6ZS17 1223 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 POLNQ7Z5Q5 900 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 MCOLN3Q8TDD5 553 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 SERAC1Q96JX3 654 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 ITGAVP06756 1048 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 CAPZA2P47755 286 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 NUP107P57740 925 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 MSLNQ13421 630 aaPredicted RBP16.22■□□□□ 0.19
USP42-201ENST00000306177 PHKG1Q16816 387 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 TBCELQ5QJ74 424 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 PPM1LQ5SGD2 360 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 IZUMO2Q6UXV1 221 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 C12orf56Q8IXR9 622 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 BTN2A2Q8WVV5 523 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 MED8Q96G25 268 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 MFSD14AQ96MC6 490 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 POMKQ9H5K3 350 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 NRDE2Q9H7Z3 1164 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 RCCD1A6NED2 376 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 YDJCA8MPS7 323 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 BTN3A1O00481 513 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 PGK1P00558 417 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 ERVK-10P10266 1014 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 MRPL28Q13084 256 aaKnown RBP16.22■□□□□ 0.19
USP42-201ENST00000306177 PLCL1Q15111 1095 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 ZC3H12AQ5D1E8 599 aaKnown RBP16.22■□□□□ 0.19
USP42-201ENST00000306177 NEPROQ6NW34 567 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 PLEKHM3Q6ZWE6 761 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 SYTL1Q8IYJ3 562 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 STK40Q8N2I9 435 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 METTL6Q8TCB7 284 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 LZTS1Q9Y250 596 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 TRIM17Q9Y577 477 aa16.22■□□□□ 0.19
USP42-201ENST00000306177 OPLAHO14841 1288 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 ACADMP11310 421 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 SLC16A1P53985 500 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 ZNF557Q8N988 423 aaPredicted RBP16.21■□□□□ 0.19
USP42-201ENST00000306177 ZNF670Q9BS34 389 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 CXorf56Q9H5V9 222 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 MAP2K7O14733 419 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 TSHRP16473 764 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 CCT8P50990 548 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 POLR2LP62875 67 aaKnown RBP16.21■□□□□ 0.19
USP42-201ENST00000306177 ZCCHC23Q6ZST2 131 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 C16orf59Q7L2K0 433 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 IRF2BP2Q7Z5L9 587 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 MILR1Q7Z6M3 343 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 OR52K1Q8NGK4 314 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 PCDHA11Q9Y5I1 949 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 TPP1O14773 563 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 FMO4P31512 558 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 RFX3P48380 749 aa16.21■□□□□ 0.19
USP42-201ENST00000306177 RAD23AP54725 363 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms