RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 MAGEB16A2A368 324 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 ATP8B1O43520 1251 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 PYGMP11217 842 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 NR1D1P20393 614 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 UBE3AQ05086 875 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 GRM3Q14832 879 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 LRRC26Q2I0M4 334 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 ACAD11Q709F0 780 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 JOSD2Q8TAC2 188 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 IRF7Q92985 503 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 TBL1YQ9BQ87 522 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 NSUN3Q9H649 340 aaKnown RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 PCDH9Q9HC56 1237 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 GDAP2Q9NXN4 497 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 WWOXQ9NZC7 414 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 GOLGA8RI6L899 631 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 CDH16O75309 829 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 H2AFYO75367 372 aaKnown RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 VNN1O95497 513 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 SNRPAP09012 282 aaKnown RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 CD86P42081 329 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 PRKAA1Q13131 559 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 FAM83EQ2M2I3 478 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 TXNDC8Q6A555 127 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 RAET1GQ6H3X3 334 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 XYLT1Q86Y38 959 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 TRAPPC5Q8IUR0 188 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 BPIFB1Q8TDL5 484 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 SHISA4Q96DD7 197 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 FGD4Q96M96 766 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 RNF157Q96PX1 679 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 MYOCQ99972 504 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 PPCSQ9HAB8 311 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 PSMC3IPQ9P2W1 217 aaPredicted RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 RNASEH2AO75792 299 aaKnown RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 ANP32DO95626 131 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 MZF1P28698 734 aaPredicted RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 RBL1P28749 1068 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 FLT3P36888 993 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 GPR1P46091 355 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 PPP1R15BQ5SWA1 713 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 FAM126BQ8IXS8 530 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 SMG8Q8ND04 991 aaKnown RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 ACTRT1Q8TDG2 376 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 TMEM40Q8WWA1 233 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 FAM136AQ96C01 138 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 MCCC1Q96RQ3 725 aaPredicted RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 RHOBTB2Q9BYZ6 727 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 IARS2Q9NSE4 1012 aaKnown RBP9.45□□□□□ -0.9
PTPRE-202ENST00000306042 TDP1Q9NUW8 608 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 DNPEPQ9ULA0 475 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 OGDHLQ9ULD0 1010 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 PCDHGB4Q9UN71 923 aa9.45□□□□□ -0.9
PTPRE-202ENST00000306042 MTMR11A4FU01 709 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 C9IYK1 514 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 GRK3P35626 688 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 CBX2Q14781 532 aaPredicted RBP9.44□□□□□ -0.9
PTPRE-202ENST00000306042 INSCQ1MX18 579 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 IRF2BP1Q8IU81 584 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 TFAP2BQ92481 460 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 RUBCNQ92622 972 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 ZNF333Q96JL9 665 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 PRDM12Q9H4Q4 367 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 FAM96AQ9H5X1 160 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 PAPPAQ13219 1627 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 KCNU1A8MYU2 1149 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 FAM155AB1AL88 458 aaPredicted RBP9.44□□□□□ -0.9
PTPRE-202ENST00000306042 OR56A5P0C7T3 313 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 CES1P23141 567 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 PTPN3P26045 913 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 LRPAP1P30533 357 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 MORF4L2Q15014 288 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 SPDYAQ5MJ70 313 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 SLC39A4Q6P5W5 647 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 POLNQ7Z5Q5 900 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 ANKS1BQ7Z6G8 1248 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 TAC4Q86UU9 113 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 CRYBG2Q8N1P7 616 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 FAM129AQ9BZQ8 928 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 LMAN2LQ9H0V9 348 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 COQ4Q9Y3A0 265 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 GJB5O95377 273 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 PRNPP04156 253 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 HNRNPA1P09651 372 aaKnown RBP eCLIP9.44□□□□□ -0.9
PTPRE-202ENST00000306042 NPY2RP49146 381 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 XRCC4Q13426 336 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 BOP1Q14137 746 aaKnown RBP9.44□□□□□ -0.9
PTPRE-202ENST00000306042 UPP1Q16831 310 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 PLEKHG4Q58EX7 1191 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 CLEC20AQ6ZU45 233 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 MARK2Q7KZI7 788 aaKnown RBP9.44□□□□□ -0.9
PTPRE-202ENST00000306042 OTOAQ7RTW8 1153 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 IRF2BP2Q7Z5L9 587 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 LRRC6Q86X45 466 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 REXO1L1PQ8IX06 675 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 HERVK_113Q902F9 699 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 GPR62Q9BZJ7 368 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 PCMTD2Q9NV79 361 aa9.44□□□□□ -0.9
PTPRE-202ENST00000306042 COMMD8Q9NX08 183 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms