RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 HERC2P3Q9BVR0 1158 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 EIF2B3Q9NR50 452 aaKnown RBP14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 SHROOM3Q8TF72 1996 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 FOXO6A8MYZ6 492 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 IFNAR2P48551 515 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 HARS2P49590 506 aaKnown RBP14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 PLD1Q13393 1074 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 MS4A13Q5J8X5 152 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 HECTD3Q5T447 861 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 EBNA1BP2Q99848 306 aaKnown RBP14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 EPN3Q9H201 632 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 TRABDQ9H4I3 376 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 SENP1Q9P0U3 644 aa14.86□□□□□ -0.03
SHCBP1-201ENST00000303383 MLNP12872 115 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 CCNB1P14635 433 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 NFKB1P19838 968 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 CCNCP24863 283 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 MTA1Q13330 715 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 ANO4Q32M45 955 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 KBTBD12Q3ZCT8 623 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 PAIP2Q9BPZ3 127 aaKnown RBP14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 SLC39A8Q9C0K1 460 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 IL23AQ9NPF7 189 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 YIPF1Q9Y548 306 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 IQANK1A0A1B0GTG1 560 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 SEC24AO95486 1093 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 ZBTB17Q13105 803 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 LRRC8BQ6P9F7 803 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 DDX53Q86TM3 631 aaKnown RBP14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 FIBCD1Q8N539 461 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 WDR83Q9BRX9 315 aaKnown RBP14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 GBA3Q9H227 469 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 BFARQ9NZS9 450 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 FGBP02675 491 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 RHOQP17081 205 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 EPHB3P54753 998 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 C1QTNF8P60827 252 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 NRG1Q02297 640 aaPredicted RBP14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 ACBD5Q5T8D3 534 aaPredicted RBP14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 LGSNQ5TDP6 509 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 VWCEQ96DN2 955 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 TTLL2Q9BWV7 592 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 SP110Q9HB58 689 aa14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 HBS1LQ9Y450 684 aaKnown RBP14.85□□□□□ -0.03
SHCBP1-201ENST00000303383 F5H5T6 163 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 CSPG5O95196 566 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 GSTA2P09210 222 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 MGAT1P26572 445 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 HOXC13P31276 330 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 SLC11A2P49281 568 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 SEC24CP53992 1094 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 ZNF33AQ06730 810 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 LRRC14Q15048 493 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 TNFAIP8L3Q5GJ75 292 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 MANEALQ5VSG8 457 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 CPLX4Q7Z7G2 160 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 LRRC49Q8IUZ0 686 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 TTC16Q8NEE8 873 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 GSDMBQ8TAX9 411 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 TEKT5Q96M29 485 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 UBP1Q9NZI7 540 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 FETUBQ9UGM5 382 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 ACTL7BQ9Y614 415 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 GMNCA6NCL1 334 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 ERI2A8K979 691 aaKnown RBP14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 USP12O75317 370 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 CRADDP78560 199 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 RING1Q06587 406 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 ITKQ08881 620 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 PPIGQ13427 754 aaKnown RBP eCLIP14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 ARHGAP36Q6ZRI8 547 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 LRRC6Q86X45 466 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 RNF168Q8IYW5 571 aaPredicted RBP14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 OVCA2Q8WZ82 227 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 MLXIPLQ9NP71 852 aa14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 IPO11Q9UI26 975 aaKnown RBP14.84□□□□□ -0.03
SHCBP1-201ENST00000303383 TRDMT1O14717 391 aaKnown RBP14.83□□□□□ -0.03
SHCBP1-201ENST00000303383 SPAG7O75391 227 aa14.83□□□□□ -0.03
SHCBP1-201ENST00000303383 CREB1P16220 341 aa14.83□□□□□ -0.03
SHCBP1-201ENST00000303383 PAPOLAP51003 745 aaKnown RBP14.83□□□□□ -0.03
SHCBP1-201ENST00000303383 TWF1Q12792 350 aa14.83□□□□□ -0.03
SHCBP1-201ENST00000303383 FBXL22Q6P050 247 aa14.83□□□□□ -0.03
SHCBP1-201ENST00000303383 UNC5AQ6ZN44 842 aa14.83□□□□□ -0.03
SHCBP1-201ENST00000303383 CCNJLQ8IV13 435 aa14.83□□□□□ -0.03
SHCBP1-201ENST00000303383 C4orf33Q8N1A6 199 aa14.83□□□□□ -0.03
SHCBP1-201ENST00000303383 MPP5Q8N3R9 675 aa14.83□□□□□ -0.03
SHCBP1-201ENST00000303383 CDKL2Q92772 493 aa14.83□□□□□ -0.03
SHCBP1-201ENST00000303383 SIGLEC10Q96LC7 697 aa14.83□□□□□ -0.03
SHCBP1-201ENST00000303383 PRMT1Q99873 361 aaKnown RBP14.83□□□□□ -0.03
SHCBP1-201ENST00000303383 NDFIP2Q9NV92 336 aa14.83□□□□□ -0.03
SHCBP1-201ENST00000303383 PSMD3O43242 534 aa14.83□□□□□ -0.04
SHCBP1-201ENST00000303383 ABLIM3O94929 683 aa14.83□□□□□ -0.04
SHCBP1-201ENST00000303383 AP2A1O95782 977 aa14.83□□□□□ -0.04
SHCBP1-201ENST00000303383 MT-ND3P03897 115 aa14.83□□□□□ -0.04
SHCBP1-201ENST00000303383 TRABD2AQ86V40 505 aa14.83□□□□□ -0.04
SHCBP1-201ENST00000303383 NLRP14Q86W24 1093 aa14.83□□□□□ -0.04
SHCBP1-201ENST00000303383 OR52K1Q8NGK4 314 aa14.83□□□□□ -0.04
SHCBP1-201ENST00000303383 MAML1Q92585 1016 aa14.83□□□□□ -0.04
SHCBP1-201ENST00000303383 TSGA13Q96PP4 275 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms