RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 ADAMTS19Q8TE59 1207 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 ARHGEF2Q92974 986 aaKnown RBP12.31□□□□□ -0.44
TPM3-202ENST00000302206 MYRFLQ96LU7 910 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 PPP1R2P1Q96PQ5 205 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 UHRF1Q96T88 793 aaPredicted RBP12.31□□□□□ -0.44
TPM3-202ENST00000302206 CYTH2Q99418 400 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 GAS2L1Q99501 681 aaPredicted RBP12.31□□□□□ -0.44
TPM3-202ENST00000302206 SIK2Q9H0K1 926 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 GBA3Q9H227 469 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.31□□□□□ -0.44
TPM3-202ENST00000302206 THEGQ9P2T0 379 aa12.31□□□□□ -0.44
TPM3-202ENST00000302206 PSMC3IPQ9P2W1 217 aaPredicted RBP12.31□□□□□ -0.44
TPM3-202ENST00000302206 MRPL42Q9Y6G3 142 aaKnown RBP12.31□□□□□ -0.44
TPM3-202ENST00000302206 ZNF638Q14966 1978 aaKnown RBP12.3□□□□□ -0.44
TPM3-202ENST00000302206 AP3B1O00203 1094 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 CACNG3O60359 315 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 BANF1O75531 89 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 SOAT2O75908 522 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 SUN1O94901 812 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 URODP06132 367 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 SRGAP2BP0DMP2 458 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 RHOQP17081 205 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 DNAJB2P25686 324 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 SSTR1P30872 391 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 PPP3CCP48454 512 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 NDST2P52849 883 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 TEX44Q53QW1 395 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 C10orf120Q5SQS8 335 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 FAXCQ5TGI0 409 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 PIK3R6Q5UE93 754 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 NUGGCQ68CJ6 796 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 TIGD7Q6NT04 549 aaPredicted RBP12.3□□□□□ -0.44
TPM3-202ENST00000302206 LRRC31Q6UY01 552 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 PID1Q7Z2X4 250 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 NLRP14Q86W24 1093 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 ARHGAP12Q8IWW6 846 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 UMODL1-AS1Q8N2C9 162 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 CCDC33Q8N5R6 958 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 STKLD1Q8NE28 680 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 KCNV2Q8TDN2 545 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 GPR152Q8TDT2 470 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 GIPC2Q8TF65 315 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 LRRN4Q8WUT4 740 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 PPM1EQ8WY54 764 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 TRMT2BQ96GJ1 504 aaKnown RBP12.3□□□□□ -0.44
TPM3-202ENST00000302206 SIGLEC10Q96LC7 697 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 ASB2Q96Q27 587 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 EBNA1BP2Q99848 306 aaKnown RBP12.3□□□□□ -0.44
TPM3-202ENST00000302206 NAT9Q9BTE0 207 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 SEPT10Q9P0V9 454 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 KLHL8Q9P2G9 620 aaPredicted RBP12.3□□□□□ -0.44
TPM3-202ENST00000302206 CHMP2BQ9UQN3 213 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 SSX2IPQ9Y2D8 614 aa12.3□□□□□ -0.44
TPM3-202ENST00000302206 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.29□□□□□ -0.44
TPM3-202ENST00000302206 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.29□□□□□ -0.44
TPM3-202ENST00000302206 SLC12A8A0AV02 714 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 DRGXA6NNA5 263 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 TLR5O60602 858 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 CPP00450 1065 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 PRKCHP24723 683 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 PSMB4P28070 264 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 LSP1P33241 339 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 IFNAR2P48551 515 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 SLC18A1P54219 525 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 HTRA4P83105 476 aaPredicted RBP12.29□□□□□ -0.44
TPM3-202ENST00000302206 GUCY1A3Q02108 690 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 PPIGQ13427 754 aaKnown RBP eCLIP12.29□□□□□ -0.444e-7■□□□□ 9.5
TPM3-202ENST00000302206 SKIDA1Q1XH10 827 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 MS4A13Q5J8X5 152 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 HP1BP3Q5SSJ5 553 aaPredicted RBP12.29□□□□□ -0.44
TPM3-202ENST00000302206 STEAP4Q687X5 459 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 ADGRD1Q6QNK2 874 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 C14orf80Q86SX3 495 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 IGDCC3Q8IVU1 814 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 TP53INP2Q8IXH6 220 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 TCEAL8Q8IYN2 117 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 AGGF1Q8N302 714 aaeCLIP12.29□□□□□ -0.44
TPM3-202ENST00000302206 ATPAF2Q8N5M1 289 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 ZSCAN18Q8TBC5 510 aaPredicted RBP12.29□□□□□ -0.44
TPM3-202ENST00000302206 FBF1Q8TES7 1133 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 AZIN2Q96A70 460 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 TEKT5Q96M29 485 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 XPO6Q96QU8 1125 aaKnown RBP12.29□□□□□ -0.44
TPM3-202ENST00000302206 IL12RB2Q99665 862 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 PRMT1Q99873 361 aaKnown RBP12.29□□□□□ -0.44
TPM3-202ENST00000302206 C1QTNF1Q9BXJ1 281 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 ZYG11BQ9C0D3 744 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 EPN3Q9H201 632 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 ZNF576Q9H609 170 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 CCDC134Q9H6E4 229 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 RXFP1Q9HBX9 757 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 SSU72Q9NP77 194 aaKnown RBP12.29□□□□□ -0.44
TPM3-202ENST00000302206 TMEM248Q9NWD8 314 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 ZC3H7BQ9UGR2 993 aaKnown RBP12.29□□□□□ -0.44
TPM3-202ENST00000302206 DNMT3LQ9UJW3 386 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 NUDT5Q9UKK9 219 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 MYO9BQ13459 2157 aa12.29□□□□□ -0.44
TPM3-202ENST00000302206 TCRBV9S1A1TA0A576 114 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 ZNF840PA6NDX5 716 aa12.28□□□□□ -0.44
TPM3-202ENST00000302206 SDR42E2A6NKP2 422 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms