RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 ELMOD1Q8N336 334 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 EPS8L3Q8TE67 593 aaKnown RBP16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 DEPDC1BQ8WUY9 529 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 AZIN2Q96A70 460 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 LRRC39Q96DD0 335 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 RETREG1Q9H6L5 497 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 ALG13Q9NP73 1137 aaKnown RBP16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 ACSL4O60488 711 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 BANF1O75531 89 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 TACR2P21452 398 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 PSMB4P28070 264 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 LONRF1Q17RB8 773 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 C9orf50Q5SZB4 431 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 FAM182AQ5T1J6 154 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 MRPL43Q8N983 215 aaKnown RBP16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 PPCSQ9HAB8 311 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 NDFIP2Q9NV92 336 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 RSPH14Q9UHP6 348 aa16.1■□□□□ 0.17
HERPUD1-201ENST00000300302 C2orf78A6NCI8 922 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 SPAG6O75602 509 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 GLUD1P00367 558 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 C8AP07357 584 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 MLNP12872 115 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 ATP5DP30049 168 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 MAGEA10P43363 369 aaPredicted RBP16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 SLCO1A2P46721 670 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 ERVFC1P60507 584 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 TFAP2DQ7Z6R9 452 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 CAND1Q86VP6 1230 aaKnown RBP16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 SH2D3CQ8N5H7 860 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 PDCD7Q8N8D1 485 aaKnown RBP16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 KREMEN2Q8NCW0 462 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 IGSF8Q969P0 613 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 TEKT5Q96M29 485 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 AGAP3Q96P47 875 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 GBA3Q9H227 469 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 TLR9Q9NR96 1032 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 NOVA2Q9UNW9 492 aaKnown RBP16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 TEX264Q9Y6I9 313 aa16.09■□□□□ 0.17
HERPUD1-201ENST00000300302 EXOC1LA0A1B0GW35 172 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 LINC01553A4QN01 128 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 ARHGAP42A6NI28 874 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 ERI2A8K979 691 aaKnown RBP16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 MATN3O15232 486 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 ZBTB24O43167 697 aaPredicted RBP16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 MAFKO60675 156 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 AGTP01019 485 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 JCHAINP01591 159 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 F11P03951 625 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 CCNB1P14635 433 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 NR1D1P20393 614 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 ELK3P41970 407 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 MAPKAPK2P49137 400 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 PAPOLAP51003 745 aaKnown RBP16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 IFI35P80217 286 aaPredicted RBP16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 ZBTB17Q13105 803 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 PRPSAP1Q14558 356 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 SKIDA1Q1XH10 827 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 ANO4Q32M45 955 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 ALFQ53S48 1182 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 RABGAP1LQ5R372 815 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 PLPP4Q5VZY2 271 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 NADSYN1Q6IA69 706 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 C3orf62Q6ZUJ4 267 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 LGI2Q8N0V4 545 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 ARFGAP2Q8N6H7 521 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 SPPL3Q8TCT6 385 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 POF1BQ8WVV4 589 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 RNF38Q9H0F5 515 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 ZNF334Q9HCZ1 680 aaPredicted RBP16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 CHMP2BQ9UQN3 213 aa16.08■□□□□ 0.17
HERPUD1-201ENST00000300302 NUP205Q92621 2012 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 C2orf71A6NGG8 1288 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 C5orf67F2Z3F1 127 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 CDH16O75309 829 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 AVILO75366 819 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 STC2O76061 302 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 CNTN5O94779 1100 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 MBL2P11226 248 aaPredicted RBP16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 MAGEA3P43357 314 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 MTM1Q13496 603 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 C5orf22Q49AR2 442 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 CAPN12Q6ZSI9 719 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 TMEM150AQ86TG1 271 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 DENND1CQ8IV53 801 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 RIBC1Q8N443 379 aaPredicted RBP16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 MICAL1Q8TDZ2 1067 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 PPP1R2P1Q96PQ5 205 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 DDX50Q9BQ39 737 aaKnown RBP16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 KLF16Q9BXK1 252 aaPredicted RBP16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 TRPC7Q9HCX4 862 aa16.08■□□□□ 0.16
HERPUD1-201ENST00000300302 DOCK4Q8N1I0 1966 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 GOLGA6L7A0A1B0GV03 622 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 GRXCR1A8MXD5 290 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 F5H423 210 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 NEBLO76041 1014 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 RB1P06400 928 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 OR1E1P30953 314 aa16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 CORO1AP31146 461 aaKnown RBP16.07■□□□□ 0.16
HERPUD1-201ENST00000300302 IRAK1P51617 712 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms