RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 MCCD1P59942 119 aaPredicted RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ZNF177Q13360 481 aaPredicted RBP15.12■□□□□ 0.01
SCN3B-201ENST00000299333 CARTPTQ16568 116 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 KCNV1Q6PIU1 500 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ZNF621Q6ZSS3 439 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 CPNE1Q99829 537 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 SIK3Q9Y2K2 1263 aa15.12■□□□□ 0.01
SCN3B-201ENST00000299333 ERBB3P21860 1342 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 CYP27B1O15528 508 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 CCNKO75909 580 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 CRTAMO95727 393 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 RAP1GAPP47736 663 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 PRKAA2P54646 552 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 EIF3MQ7L2H7 374 aaKnown RBP15.11■□□□□ 0.01
SCN3B-201ENST00000299333 DCP1BQ8IZD4 617 aaKnown RBP15.11■□□□□ 0.01
SCN3B-201ENST00000299333 MASTLQ96GX5 879 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 ZC3H10Q96K80 434 aaKnown RBP15.11■□□□□ 0.01
SCN3B-201ENST00000299333 DNAJC11Q9NVH1 559 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 PRKAG3Q9UGI9 489 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 RTN3O95197 1032 aaPredicted RBP15.11■□□□□ 0.01
SCN3B-201ENST00000299333 PGAM1P18669 254 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 GRK4P32298 578 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 RPL14P50914 215 aaKnown RBP15.11■□□□□ 0.01
SCN3B-201ENST00000299333 SUZ12Q15022 739 aaKnown RBP15.11■□□□□ 0.01
SCN3B-201ENST00000299333 C15orf59Q2T9L4 293 aaPredicted RBP15.11■□□□□ 0.01
SCN3B-201ENST00000299333 METTL6Q8TCB7 284 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 CCDC115Q96NT0 180 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 IL25Q9H293 177 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 DPP3Q9NY33 737 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 LYVE1Q9Y5Y7 322 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 AFF2P51816 1311 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 ASB14A6NK59 587 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 PSMD12O00232 456 aaPredicted RBP15.11■□□□□ 0.01
SCN3B-201ENST00000299333 ASS1P00966 412 aaKnown RBP15.11■□□□□ 0.01
SCN3B-201ENST00000299333 ITGALP20701 1170 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 CDC42P60953 191 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 EIF2S3LQ2VIR3 472 aaKnown RBP15.11■□□□□ 0.01
SCN3B-201ENST00000299333 FNBP1LQ5T0N5 605 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 OLFML2AQ68BL7 652 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 LSM14AQ8ND56 463 aaKnown RBP15.11■□□□□ 0.01
SCN3B-201ENST00000299333 DGCR14Q96DF8 476 aaKnown RBP15.11■□□□□ 0.01
SCN3B-201ENST00000299333 MXRA8Q9BRK3 442 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 NT5MQ9NPB1 228 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 FBXO28Q9NVF7 368 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 ARHGAP28Q9P2N2 729 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 CDC42BPBQ9Y5S2 1711 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 IQCMA0A1B0GVH7 501 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 A0A1W2PQ72 361 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 PRRG1O14668 218 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 RPS6KA5O75582 802 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 NDUFB10O96000 172 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 COX4I1P13073 169 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 CCNHP51946 323 aaPredicted RBP15.11■□□□□ 0.01
SCN3B-201ENST00000299333 ACLYP53396 1101 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 ZFP69Q49AA0 526 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 ERMARDQ5T6L9 678 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 EFCAB12Q6NXP0 572 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 ARHGAP36Q6ZRI8 547 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 CREG2Q8IUH2 290 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 CLK4Q9HAZ1 481 aaKnown RBP15.11■□□□□ 0.01
SCN3B-201ENST00000299333 NMRAL1Q9HBL8 299 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 COG5Q9UP83 839 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 CROCC2H7BZ55 1655 aa15.11■□□□□ 0.01
SCN3B-201ENST00000299333 CES2O00748 559 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 CSDE1O75534 798 aaKnown RBP15.1■□□□□ 0.01
SCN3B-201ENST00000299333 NADKO95544 446 aaPredicted RBP15.1■□□□□ 0.01
SCN3B-201ENST00000299333 HMGCS2P54868 508 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 UBAP2LQ14157 1087 aaKnown RBP15.1■□□□□ 0.01
SCN3B-201ENST00000299333 HMBOX1Q6NT76 420 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.1■□□□□ 0.01
SCN3B-201ENST00000299333 AMIGO2Q86SJ2 522 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 TRPV5Q9NQA5 729 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 SLC38A7Q9NVC3 462 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 PRR36Q9H6K5 1346 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 HECW2Q9P2P5 1572 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 C15orf38-AP3S2A0A0A6YYH1 394 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 NR3C2P08235 984 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 FDX1P10109 184 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 PRKAR1AP10644 381 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 SLC15A2Q16348 729 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 SPESP1Q6UW49 350 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 ARPINQ7Z6K5 226 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 PEG10Q86TG7 708 aaKnown RBP15.1■□□□□ 0.01
SCN3B-201ENST00000299333 ASB12Q8WXK4 309 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 MED8Q96G25 268 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 CBWD1Q9BRT8 395 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 WDR12Q9GZL7 423 aaKnown RBP15.1■□□□□ 0.01
SCN3B-201ENST00000299333 CRISPLD1Q9H336 500 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 PDGFCQ9NRA1 345 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 SLC25A13Q9UJS0 675 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 CRABP2P29373 138 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 BNC1Q01954 994 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 MTMR2Q13614 643 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 ANKS6Q68DC2 871 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 TRIM48Q8IWZ4 208 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 HPSEQ9Y251 543 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 MAGEB16A2A368 324 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 UBE2Q2LH0YL09 131 aa15.1■□□□□ 0.01
SCN3B-201ENST00000299333 KHDRBS3O75525 346 aaKnown RBP15.1■□□□□ 0.01
SCN3B-201ENST00000299333 MUTP22033 750 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms