RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 CDK16Q00536 496 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 PLD1Q13393 1074 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 TAF12Q16514 161 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 HP1BP3Q5SSJ5 553 aaPredicted RBP15.93■□□□□ 0.14
LSM6-201ENST00000296581 SYCP2LQ5T4T6 812 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 ZNF534Q76KX8 674 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 DNAJB7Q7Z6W7 309 aaPredicted RBP15.93■□□□□ 0.14
LSM6-201ENST00000296581 CAND1Q86VP6 1230 aaKnown RBP15.93■□□□□ 0.14
LSM6-201ENST00000296581 ANKMY2Q8IV38 441 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 DEPDC1BQ8WUY9 529 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 PSMG2Q969U7 264 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 SLC39A8Q9C0K1 460 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 NDFIP2Q9NV92 336 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 MPP6Q9NZW5 540 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 UXTQ9UBK9 157 aaPredicted RBP15.93■□□□□ 0.14
LSM6-201ENST00000296581 TEX264Q9Y6I9 313 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 NYNRINQ9P2P1 1898 aaKnown RBP15.93■□□□□ 0.14
LSM6-201ENST00000296581 TLDC2A0PJX2 215 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 COCHO43405 550 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 ATP2A2P16615 1042 aaKnown RBP15.93■□□□□ 0.14
LSM6-201ENST00000296581 CCNCP24863 283 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 GPX6P59796 221 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 CCDC38Q502W7 563 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 TTC19Q6DKK2 380 aaPredicted RBP15.93■□□□□ 0.14
LSM6-201ENST00000296581 FBXL22Q6P050 247 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 UMODL1-AS1Q8N2C9 162 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 ATP11CQ8NB49 1132 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 FBXO36Q8NEA4 188 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 CCDC77Q9BR77 488 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 CEP41Q9BYV8 373 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 SLC24A3Q9HC58 644 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 TMEM248Q9NWD8 314 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 KLHL8Q9P2G9 620 aaPredicted RBP15.93■□□□□ 0.14
LSM6-201ENST00000296581 TRHDEQ9UKU6 1024 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 NOVA2Q9UNW9 492 aaKnown RBP15.93■□□□□ 0.14
LSM6-201ENST00000296581 LZTS1Q9Y250 596 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 OBSL1O75147 1896 aa15.93■□□□□ 0.14
LSM6-201ENST00000296581 LCHNA4D1U4 455 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 E7EVH7 732 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 RGS16O15492 202 aaPredicted RBP15.92■□□□□ 0.14
LSM6-201ENST00000296581 TGM5O43548 720 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 OAS1P00973 400 aaKnown RBP15.92■□□□□ 0.14
LSM6-201ENST00000296581 PAX7P23759 505 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 PSMB4P28070 264 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 BMPR1AP36894 532 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 KCNQ1P51787 676 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 ZBTB17Q13105 803 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 LONRF1Q17RB8 773 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 TEX44Q53QW1 395 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 RAP1GAP2Q684P5 730 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 NADSYN1Q6IA69 706 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 LILRA6Q6PI73 481 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 KDM7AQ6ZMT4 941 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 PID1Q7Z2X4 250 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 LRRC49Q8IUZ0 686 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 AGGF1Q8N302 714 aaeCLIP15.92■□□□□ 0.14
LSM6-201ENST00000296581 XAB2Q9HCS7 855 aaKnown RBP15.92■□□□□ 0.14
LSM6-201ENST00000296581 IRAK3Q9Y616 596 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 DFFAO00273 331 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 TLL1O43897 1013 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 CXCL14O95715 111 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 AGTP01019 485 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 SYN1P17600 705 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 NR1D1P20393 614 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 ELK3P41970 407 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 SLCO1A2P46721 670 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 IRAK1P51617 712 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 C5orf22Q49AR2 442 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 TMEM150AQ86TG1 271 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 ITIH5Q86UX2 942 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 ATPAF2Q8N5M1 289 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 N4BP2L2Q92802 583 aaPredicted RBP15.92■□□□□ 0.14
LSM6-201ENST00000296581 IGSF8Q969P0 613 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 PLD4Q96BZ4 506 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 LRRC39Q96DD0 335 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 KLHL5Q96PQ7 755 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 PLCD4Q9BRC7 762 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 NACA2Q9H009 215 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 NOL6Q9H6R4 1146 aaKnown RBP15.92■□□□□ 0.14
LSM6-201ENST00000296581 VPS37BQ9H9H4 285 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 ZNF212Q9UDV6 495 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 ASB3Q9Y575 518 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 FAM169AQ9Y6X4 670 aa15.92■□□□□ 0.14
LSM6-201ENST00000296581 SMIM23A6NLE4 172 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 MAFKO60675 156 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 AVILO75366 819 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 MLNP12872 115 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 TACR2P21452 398 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 NDST2P52849 883 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 SKOR1P84550 965 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 ALFQ53S48 1182 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 ARHGAP36Q6ZRI8 547 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 TMC7Q7Z402 723 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 IGDCC3Q8IVU1 814 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 AZIN2Q96A70 460 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 TEKT5Q96M29 485 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 GBA3Q9H227 469 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 EURLQ9NYK6 297 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 LGALS13Q9UHV8 139 aa15.91■□□□□ 0.14
LSM6-201ENST00000296581 CHMP2BQ9UQN3 213 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms