RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 PCSK9Q8NBP7 692 aaKnown RBP13.51□□□□□ -0.25
RUBCN-202ENST00000296343 KLHDC9Q8NEP7 349 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 RTP4Q96DX8 246 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 GORASP1Q9BQQ3 440 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 MLPHQ9BV36 600 aaPredicted RBP13.51□□□□□ -0.25
RUBCN-202ENST00000296343 CRISPLD1Q9H336 500 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 PCDHA11Q9Y5I1 949 aa13.51□□□□□ -0.25
RUBCN-202ENST00000296343 A0A1W2PQ45 241 aaPredicted RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 A0A1W2PQY0 241 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 PIRTP0C851 137 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 NMBRP28336 390 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 RPL9P32969 192 aaKnown RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 DUSP4Q13115 394 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 CTBP1Q13363 440 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 N4BP2L1Q5TBK1 243 aaPredicted RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 RILPQ96NA2 401 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 MYO9BQ13459 2157 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 GOLGA8CPA6NN73 597 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 PHGDHO43175 533 aaKnown RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 KPNA6O60684 536 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 FBXO21O94952 628 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 PRKCGP05129 697 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 RPL34P49207 117 aaKnown RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 XRCC4Q13426 336 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 PRKD1Q15139 912 aaPredicted RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 DEFB115Q30KQ5 88 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 VARS2Q5ST30 1063 aaKnown RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 CCSAPQ6IQ19 270 aaPredicted RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 ZNF280DQ6N043 979 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 RSPO2Q6UXX9 243 aaPredicted RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 RAPH1Q70E73 1250 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 LDB1Q86U70 411 aaPredicted RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 ATPAF2Q8N5M1 289 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 SGF29Q96ES7 293 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 FTHL17Q9BXU8 183 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 SLC39A8Q9C0K1 460 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 RXFP1Q9HBX9 757 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 XAB2Q9HCS7 855 aaKnown RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 SLC2A6Q9UGQ3 507 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 ZFP69BQ9UJL9 534 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 SLC12A4Q9UP95 1085 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 VCANP13611 3396 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 SRRM3A6NNA2 597 aaPredicted RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 OPHN1O60890 802 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 ELF3P78545 371 aaPredicted RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 RAB41Q5JT25 222 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 VWA5B1Q5TIE3 1220 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 SLC24A5Q71RS6 500 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 BZW1Q7L1Q6 419 aaKnown RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 PARP9Q8IXQ6 854 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 PLD6Q8N2A8 252 aaKnown RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 ZNF276Q8N554 614 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 TMEM120AQ9BXJ8 343 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 OXCT2Q9BYC2 517 aaPredicted RBP13.5□□□□□ -0.25
RUBCN-202ENST00000296343 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 BFARQ9NZS9 450 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 SRRDQ9UH36 339 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 SLC39A10Q9ULF5 831 aa13.5□□□□□ -0.25
RUBCN-202ENST00000296343 ITM2AO43736 263 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 CCNB1P14635 433 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 CCR10P46092 362 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 ALDH18A1P54886 795 aaKnown RBP13.49□□□□□ -0.25
RUBCN-202ENST00000296343 PDE1CQ14123 709 aaPredicted RBP13.49□□□□□ -0.25
RUBCN-202ENST00000296343 PARP6Q2NL67 630 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 ALFQ53S48 1182 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 C10orf120Q5SQS8 335 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 FAM171BQ6P995 826 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 RFWD3Q6PCD5 774 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 PACS1Q6VY07 963 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 DENND6AQ8IWF6 608 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 KCNV2Q8TDN2 545 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 EBF4Q9BQW3 602 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 ACTR5Q9H9F9 607 aaPredicted RBP13.49□□□□□ -0.25
RUBCN-202ENST00000296343 RBM22Q9NW64 420 aaKnown RBP eCLIP13.49□□□□□ -0.25
RUBCN-202ENST00000296343 PRKAG3Q9UGI9 489 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 A0A0U1RQS6 177 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 J3KR12 359 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 VAPBO95292 243 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 POLBP06746 335 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 ITGA2BP08514 1039 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 TROVE2P10155 538 aaKnown RBP eCLIP13.49□□□□□ -0.25
RUBCN-202ENST00000296343 DNAJB2P25686 324 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 ETV4P43268 484 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 ARFIP2P53365 341 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 TEX44Q53QW1 395 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 LGSNQ5TDP6 509 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 RAP1GAP2Q684P5 730 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 CDKL2Q92772 493 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 EXOC2Q96KP1 924 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 CYP2S1Q96SQ9 504 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 FICDQ9BVA6 458 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 NACA2Q9H009 215 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 KANSL3Q9P2N6 904 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 PLLPQ9Y342 182 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 PTCH2Q9Y6C5 1203 aa13.49□□□□□ -0.25
RUBCN-202ENST00000296343 NBNO60934 754 aa13.48□□□□□ -0.25
RUBCN-202ENST00000296343 IGHA2P01877 340 aa13.48□□□□□ -0.25
RUBCN-202ENST00000296343 RPSAP08865 295 aaKnown RBP13.48□□□□□ -0.25
RUBCN-202ENST00000296343 ALDH3A1P30838 453 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms