RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 VANGL2Q9ULK5 521 aa10.79□□□□□ -0.68
SNF8-201ENST00000290330 STAP1Q9ULZ2 295 aa10.79□□□□□ -0.68
SNF8-201ENST00000290330 SCML1Q9UN30 329 aa10.79□□□□□ -0.68
SNF8-201ENST00000290330 HS3ST4Q9Y661 456 aa10.79□□□□□ -0.68
SNF8-201ENST00000290330 SLCO1B1Q9Y6L6 691 aa10.79□□□□□ -0.68
SNF8-201ENST00000290330 ITIH6Q6UXX5 1313 aa10.79□□□□□ -0.68
SNF8-201ENST00000290330 EDDM13A0A1B0GTR0 161 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 FAM170AA1A519 330 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 I6L893 689 aaPredicted RBP10.78□□□□□ -0.68
SNF8-201ENST00000290330 RNASEH1O60930 286 aaKnown RBP10.78□□□□□ -0.68
SNF8-201ENST00000290330 ADCY5O95622 1261 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 MMEP08473 750 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 GGCXP38435 758 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 NNMTP40261 264 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 CXCR3P49682 368 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 STK19P49842 368 aaPredicted RBP10.78□□□□□ -0.68
SNF8-201ENST00000290330 KLK7P49862 253 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 OXCT1P55809 520 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 NOMO3P69849 1222 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 BNC1Q01954 994 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 SULT2A1Q06520 285 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 SLC14A1Q13336 389 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 CST6Q15828 149 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 SLC25A52Q3SY17 297 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 C5orf22Q49AR2 442 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 C2CD6Q53TS8 623 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 BRMS1LQ5PSV4 323 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 FAM102AQ5T9C2 384 aaPredicted RBP10.78□□□□□ -0.68
SNF8-201ENST00000290330 RNF219Q5W0B1 726 aaPredicted RBP10.78□□□□□ -0.68
SNF8-201ENST00000290330 C14orf80Q86SX3 495 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 MMAAQ8IVH4 418 aaKnown RBP10.78□□□□□ -0.68
SNF8-201ENST00000290330 RNF214Q8ND24 703 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 SNX19Q92543 992 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 PTPRN2Q92932 1015 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 BIRC7Q96CA5 298 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 FAM129BQ96TA1 746 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 FEM1AQ9BSK4 669 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 TKTL2Q9H0I9 626 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 SIK2Q9H0K1 926 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 PABPC3Q9H361 631 aaKnown RBP10.78□□□□□ -0.68
SNF8-201ENST00000290330 WDCPQ9H6R7 721 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 FBXL12Q9NXK8 326 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 ARHGEF38Q9NXL2 777 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 SERGEFQ9UGK8 458 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 NOCTQ9UK39 431 aaKnown RBP10.78□□□□□ -0.68
SNF8-201ENST00000290330 WASF3Q9UPY6 502 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 NCKAP1Q9Y2A7 1128 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 LAMA1P25391 3075 aa10.78□□□□□ -0.68
SNF8-201ENST00000290330 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.77□□□□□ -0.69
SNF8-201ENST00000290330 SPAARA0A1B0GVQ0 90 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 GOLGA6L19H0YKK7 550 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 EPHB6O15197 1021 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 MID1O15344 667 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 CLDN11O75508 207 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 GFPT2O94808 682 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 FSBPO95073 299 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 F9P00740 461 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 TPM2P07951 284 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 SLC8A1P32418 973 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 FLT3P36888 993 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 CSNK1EP49674 416 aaKnown RBP10.77□□□□□ -0.69
SNF8-201ENST00000290330 SULT1E1P49888 294 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 VASPP50552 380 aaPredicted RBP10.77□□□□□ -0.69
SNF8-201ENST00000290330 CDH4P55283 916 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 POLR2FP61218 127 aaKnown RBP10.77□□□□□ -0.69
SNF8-201ENST00000290330 TPM4P67936 248 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 DEUP1Q05D60 604 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 SFSWAPQ12872 951 aaKnown RBP10.77□□□□□ -0.69
SNF8-201ENST00000290330 FOXC1Q12948 553 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 ZNF177Q13360 481 aaPredicted RBP10.77□□□□□ -0.69
SNF8-201ENST00000290330 ELAVL3Q14576 367 aaKnown RBP10.77□□□□□ -0.69
SNF8-201ENST00000290330 ANO6Q4KMQ2 910 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 FKBP15Q5T1M5 1219 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 NAA35Q5VZE5 725 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 TRNP1Q6NT89 227 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 ZNF677Q86XU0 584 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 STK40Q8N2I9 435 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 GANCQ8TET4 914 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 FRS2Q8WU20 508 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 SLC20A1Q8WUM9 679 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 CPA5Q8WXQ8 436 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 PDLIM2Q96JY6 352 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 TBCBQ99426 244 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 ORAI3Q9BRQ5 295 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 NEUROG2Q9H2A3 272 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 OSGEPQ9NPF4 335 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 NLRC4Q9NPP4 1024 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 FAM207AQ9NSI2 230 aaPredicted RBP10.77□□□□□ -0.69
SNF8-201ENST00000290330 TMEM59LQ9UK28 342 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 TBC1D30Q9Y2I9 924 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 SIK3Q9Y2K2 1263 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 OR51B4Q9Y5P0 310 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 ADAMTS9Q9P2N4 1935 aa10.77□□□□□ -0.69
SNF8-201ENST00000290330 NUMA1Q14980 2115 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 TPRP12270 2363 aaKnown RBP10.76□□□□□ -0.69
SNF8-201ENST00000290330 A0A1B0GVT2 93 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 A0A1W2PP55 124 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 GOLGA8SH3BPF8 625 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 SH3BP5O60239 455 aa10.76□□□□□ -0.69
SNF8-201ENST00000290330 RNASEH2AO75792 299 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms