RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 CHST7Q9NS84 486 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 KLHL20Q9Y2M5 609 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 MTF2Q9Y483 593 aaPredicted RBP17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 CLCN2P51788 898 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 RNF220Q5VTB9 566 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 RNF217Q8TC41 542 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 CISHQ9NSE2 258 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 DPP3Q9NY33 737 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 GPRC5DQ9NZD1 345 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 TMCC3Q9ULS5 477 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 RNF112Q9ULX5 631 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 PKP3Q9Y446 797 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 EIF4BP23588 611 aaKnown RBP17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 CASP5P51878 434 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 TTLL9Q3SXZ7 439 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 AKAP14Q86UN6 197 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 SLC9A9Q8IVB4 645 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 POU5F2Q8N7G0 328 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 C12orf50Q8NA57 414 aaPredicted RBP17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 CAMTA1Q9Y6Y1 1673 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 FAM237BA0A1B0GVD1 139 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 TSNQ15631 228 aaKnown RBP17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 METTL21CQ5VZV1 264 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 HEATR4Q86WZ0 1026 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 ECHDC2Q86YB7 292 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 IPMKQ8NFU5 416 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 CAPSLQ8WWF8 208 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 VAT1Q99536 393 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 NMRAL1Q9HBL8 299 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 DNPEPQ9ULA0 475 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 VANGL2Q9ULK5 521 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 GMEB1Q9Y692 573 aa17.85■□□□□ 0.45
PCDHA13-201ENST00000289272 AKAP12Q02952 1782 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 VPS26AO75436 327 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 TRIM71Q2Q1W2 868 aaKnown RBP17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 DCAF6Q58WW2 860 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 TRIM74Q86UV6 250 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 TRIM73Q86UV7 250 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 EGFL6Q8IUX8 553 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 C6orf62Q9GZU0 229 aaPredicted RBP17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 TBC1D13Q9NVG8 400 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 TRMT6Q9UJA5 497 aaKnown RBP17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 ALOX12P18054 663 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 PDCD4Q53EL6 469 aaKnown RBP17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 ZFPM1Q8IX07 1006 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 RAP1GAPP47736 663 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 CD151P48509 253 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 POLNQ7Z5Q5 900 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 STOML2Q9UJZ1 356 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 PCDHA11Q9Y5I1 949 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 A0A096LPK6 155 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 BBIP1A8MTZ0 92 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 PRRG1O14668 218 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 FBXO21O94952 628 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 SEC24AO95486 1093 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 CDH17Q12864 832 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 FUT11Q495W5 492 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 TBC1D19Q8N5T2 526 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 FOPNLQ96NB1 174 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 SPATC1LQ9H0A9 340 aa17.84■□□□□ 0.45
PCDHA13-201ENST00000289272 CCDC154A6NI56 674 aa17.83■□□□□ 0.45
PCDHA13-201ENST00000289272 MEIS2O14770 477 aa17.83■□□□□ 0.45
PCDHA13-201ENST00000289272 RECQL5O94762 991 aaPredicted RBP17.83■□□□□ 0.45
PCDHA13-201ENST00000289272 FAM120BQ96EK7 910 aaKnown RBP17.83■□□□□ 0.45
PCDHA13-201ENST00000289272 CHID1Q9BWS9 393 aa17.83■□□□□ 0.45
PCDHA13-201ENST00000289272 C3orf18Q9UK00 162 aa17.83■□□□□ 0.45
PCDHA13-201ENST00000289272 INPP4BO15327 924 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 UBE3AQ05086 875 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 TMEM62Q0P6H9 643 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 BST1Q10588 318 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 DCUN1D1Q96GG9 259 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 POLR1BQ9H9Y6 1135 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 IPPQ9Y573 584 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 KLHL33A6NCF5 533 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 EGFRP00533 1210 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 SLC25A3Q00325 362 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 NFIL3Q16649 462 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 BMT2Q1RMZ1 405 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 PKN3Q6P5Z2 889 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 QKIQ96PU8 341 aaKnown RBP eCLIP17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 TBCCD1Q9NVR7 557 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 DNAJC28Q9NX36 388 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 RAP2CQ9Y3L5 183 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 PSMD12O00232 456 aaPredicted RBP17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 PGK2P07205 417 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 NEK3P51956 506 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 SLC18A1P54219 525 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 PSME3P61289 254 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 INSCQ1MX18 579 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 ARHGAP17Q68EM7 881 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 USP50Q70EL3 339 aaPredicted RBP17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 MAP4K3Q8IVH8 894 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 FITM2Q8N6M3 262 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 SLC7A14Q8TBB6 771 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 ZNF512Q96ME7 567 aaPredicted RBP17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 SPATA16Q9BXB7 569 aa17.83■□□□□ 0.44
PCDHA13-201ENST00000289272 TCEA3O75764 348 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 SOX10P56693 466 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 ARHGAP15Q53QZ3 475 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 MFSD7Q6UXD7 560 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms