RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SEL1L3Q68CR1 1132 aa16.24■□□□□ 0.19
SMAD6-201ENST00000288840 ZNF470Q6ECI4 717 aa16.24■□□□□ 0.19
SMAD6-201ENST00000288840 KYAT3Q6YP21 454 aaKnown RBP16.24■□□□□ 0.19
SMAD6-201ENST00000288840 ZNF781Q8N8C0 355 aa16.24■□□□□ 0.19
SMAD6-201ENST00000288840 VPS39Q96JC1 886 aa16.24■□□□□ 0.19
SMAD6-201ENST00000288840 CCDC68Q9H2F9 335 aa16.24■□□□□ 0.19
SMAD6-201ENST00000288840 TSPYL2Q9H2G4 693 aaPredicted RBP16.24■□□□□ 0.19
SMAD6-201ENST00000288840 SLC7A8Q9UHI5 535 aa16.24■□□□□ 0.19
SMAD6-201ENST00000288840 SFMBT1Q9UHJ3 866 aa16.24■□□□□ 0.19
SMAD6-201ENST00000288840 APPL1Q9UKG1 709 aa16.24■□□□□ 0.19
SMAD6-201ENST00000288840 AURKCQ9UQB9 309 aa16.24■□□□□ 0.19
SMAD6-201ENST00000288840 UBR3Q6ZT12 1888 aa16.24■□□□□ 0.19
SMAD6-201ENST00000288840 MSI1O43347 362 aaKnown RBP16.23■□□□□ 0.19
SMAD6-201ENST00000288840 PEX1O43933 1283 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 BNIP3LO60238 219 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 THP07101 528 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 MRPS5P82675 430 aaKnown RBP16.23■□□□□ 0.19
SMAD6-201ENST00000288840 TAF1CQ15572 869 aaPredicted RBP16.23■□□□□ 0.19
SMAD6-201ENST00000288840 NCBP2-AS2Q69YL0 99 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 LRRC8EQ6NSJ5 796 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 GPR152Q8TDT2 470 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 ABHD16BQ9H3Z7 469 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 COG4Q9H9E3 785 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 LTFP02788 710 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 PIRTP0C851 137 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 ACADSP16219 412 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 BRCC3P46736 316 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 BIRC2Q13490 618 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 MFSD10Q14728 455 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 CXCL17Q6UXB2 119 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 PLEKHH3Q7Z736 793 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 FAM156AQ8NDB6 213 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 GDPD5Q8WTR4 605 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 EMID1Q96A84 441 aaPredicted RBP16.23■□□□□ 0.19
SMAD6-201ENST00000288840 PIGVQ9NUD9 493 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 MPP6Q9NZW5 540 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 SCAMP3O14828 347 aaKnown RBP16.23■□□□□ 0.19
SMAD6-201ENST00000288840 PLIN3O60664 434 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 SIN3BO75182 1162 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 SUPT7LO94864 414 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 SORBS2O94875 1100 aaKnown RBP16.23■□□□□ 0.19
SMAD6-201ENST00000288840 CHRNGP07510 517 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 CRHR1P34998 444 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 CYP2R1Q6VVX0 501 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 SLC26A9Q7LBE3 791 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 LDB1Q86U70 411 aaPredicted RBP16.23■□□□□ 0.19
SMAD6-201ENST00000288840 PSTKQ8IV42 348 aaKnown RBP16.23■□□□□ 0.19
SMAD6-201ENST00000288840 OXCT2Q9BYC2 517 aaPredicted RBP16.23■□□□□ 0.19
SMAD6-201ENST00000288840 SP110Q9HB58 689 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 VTA1Q9NP79 307 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 EPS15L1Q9UBC2 864 aa16.23■□□□□ 0.19
SMAD6-201ENST00000288840 PGM3O95394 542 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 IL4RP24394 825 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 GRK2P25098 689 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 TKTP29401 623 aaKnown RBP16.22■□□□□ 0.19
SMAD6-201ENST00000288840 PNPLA4P41247 253 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 LILRA4P59901 499 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 STX1BP61266 288 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 SLC25A52Q3SY17 297 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 TMEM198Q66K66 360 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 NAPEPLDQ6IQ20 393 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 ANO7Q6IWH7 933 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 SPNS2Q8IVW8 549 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 PPTC7Q8NI37 304 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 NT5MQ9NPB1 228 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 ACOT9Q9Y305 439 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 A0A0G2JLL6 359 aaPredicted RBP16.22■□□□□ 0.19
SMAD6-201ENST00000288840 FAM72CH0Y354 149 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 TNPO2O14787 897 aaKnown RBP16.22■□□□□ 0.19
SMAD6-201ENST00000288840 ADRA1BP35368 520 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 THPOP40225 353 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 CXCR3P49682 368 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 TSPY1Q01534 308 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 FBXO48Q5FWF7 155 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 FAM72AQ5TYM5 149 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 KRT80Q6KB66 452 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 FAM72DQ6L9T8 149 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 FSTL4Q6MZW2 842 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 C4orf22Q6V702 233 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 TMC7Q7Z402 723 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 GPR142Q7Z601 462 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 PRRT2Q7Z6L0 340 aaPredicted RBP16.22■□□□□ 0.19
SMAD6-201ENST00000288840 FAM72BQ86X60 149 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 PPHLN1Q8NEY8 458 aaKnown RBP16.22■□□□□ 0.19
SMAD6-201ENST00000288840 NMD3Q96D46 503 aaKnown RBP16.22■□□□□ 0.19
SMAD6-201ENST00000288840 CCDC167Q9P0B6 97 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 PPM1HQ9ULR3 514 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 CDYLQ9Y232 598 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 IPPQ9Y573 584 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 COL2A1P02458 1487 aaPredicted RBP16.22■□□□□ 0.19
SMAD6-201ENST00000288840 TCRBV5S1A1TA0A578 114 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 MDM4O15151 490 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 MMP3P08254 477 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 NELFEP18615 380 aaKnown RBP16.22■□□□□ 0.19
SMAD6-201ENST00000288840 FGFR3P22607 806 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 PTPN7P35236 360 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 ENPEPQ07075 957 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 KLC3Q6P597 504 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 UNC93AQ86WB7 457 aa16.22■□□□□ 0.19
SMAD6-201ENST00000288840 CHSY1Q86X52 802 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms