RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 HADHAP40939 763 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 PDX1P52945 283 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 PURAQ00577 322 aaKnown RBP7.08□□□□□ -1.28
VPS8-201ENST00000287546 SLC25A11Q02978 314 aaKnown RBP7.08□□□□□ -1.28
VPS8-201ENST00000287546 MORN1Q5T089 497 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 COLGALT1Q8NBJ5 622 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 RSPH1Q8WYR4 309 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 MCCC1Q96RQ3 725 aaPredicted RBP7.08□□□□□ -1.28
VPS8-201ENST00000287546 SENP6Q9GZR1 1112 aaPredicted RBP7.08□□□□□ -1.28
VPS8-201ENST00000287546 R3HDMLQ9H3Y0 253 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 COPS7BQ9H9Q2 264 aaPredicted RBP7.08□□□□□ -1.28
VPS8-201ENST00000287546 KIAA0100Q14667 2235 aaKnown RBP7.08□□□□□ -1.28
VPS8-201ENST00000287546 CCDC22O60826 627 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 ANP32DO95626 131 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 CFHP08603 1231 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 MLNP12872 115 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 HOXD8P13378 290 aaPredicted RBP7.08□□□□□ -1.28
VPS8-201ENST00000287546 TPSB2P20231 275 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 JAK1P23458 1154 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 WNT7BP56706 349 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 GJA9P57773 515 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 TPSAB1Q15661 275 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 SOWAHAQ2M3V2 549 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 UAP1L1Q3KQV9 507 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 LAYNQ6UX15 382 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 MCEMP1Q8IX19 187 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 TAGAPQ8N103 731 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 VPS37AQ8NEZ2 397 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 CALML6Q8TD86 181 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 CKAP2Q8WWK9 683 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 TWNKQ96RR1 684 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.08□□□□□ -1.28
VPS8-201ENST00000287546 MUC3BQ9H195 1237 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 SSU72Q9NP77 194 aaKnown RBP7.08□□□□□ -1.28
VPS8-201ENST00000287546 PCDHB5Q9Y5E4 795 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 TRIM49D1C9J1S8 452 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 DFFAO00273 331 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 IGF2BP3O00425 579 aaKnown RBP eCLIP7.08□□□□□ -1.28
VPS8-201ENST00000287546 SMIM24O75264 130 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 PEX14O75381 377 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 RTN3O95197 1032 aaPredicted RBP7.08□□□□□ -1.28
VPS8-201ENST00000287546 AMPD1P23109 780 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 HARS2P49590 506 aaKnown RBP7.08□□□□□ -1.28
VPS8-201ENST00000287546 SF3A3Q12874 501 aaKnown RBP eCLIP7.08□□□□□ -1.28
VPS8-201ENST00000287546 IKBKEQ14164 716 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 RASA2Q15283 850 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 OASLQ15646 514 aaKnown RBP7.08□□□□□ -1.28
VPS8-201ENST00000287546 DPYSL2Q16555 572 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 DENND5BQ6ZUT9 1274 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 PLD5Q8N7P1 536 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 GIPC2Q8TF65 315 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 SLC35F5Q8WV83 523 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 KCTD13Q8WZ19 329 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 RSRC1Q96IZ7 334 aaKnown RBP7.08□□□□□ -1.28
VPS8-201ENST00000287546 CIPCQ9C0C6 399 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 SDCBP2Q9H190 292 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 ZFP69BQ9UJL9 534 aa7.08□□□□□ -1.28
VPS8-201ENST00000287546 PRG3Q9Y2Y8 225 aaPredicted RBP7.08□□□□□ -1.28
VPS8-201ENST00000287546 MTO1Q9Y2Z2 717 aaKnown RBP7.08□□□□□ -1.28
VPS8-201ENST00000287546 COL11A1P12107 1806 aaPredicted RBP7.07□□□□□ -1.28
VPS8-201ENST00000287546 PIRO00625 290 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 HGSO14964 777 aaPredicted RBP7.07□□□□□ -1.28
VPS8-201ENST00000287546 PAPSS1O43252 624 aaPredicted RBP7.07□□□□□ -1.28
VPS8-201ENST00000287546 TIMM44O43615 452 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 GLRA3O75311 464 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 HAUS5O94927 633 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 IRF1P10914 325 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 ALADP13716 330 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 PRKAR2AP13861 404 aaKnown RBP7.07□□□□□ -1.28
VPS8-201ENST00000287546 GNSP15586 552 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 NSUN2Q08J23 767 aaKnown RBP eCLIP7.07□□□□□ -1.28
VPS8-201ENST00000287546 SMARCB1Q12824 385 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 BRMS1LQ5PSV4 323 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 PPM1LQ5SGD2 360 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 KIAA1324Q6UXG2 1013 aaKnown RBP7.07□□□□□ -1.28
VPS8-201ENST00000287546 RD3Q7Z3Z2 195 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 EXOC3L1Q86VI1 746 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 CAPNS2Q96L46 248 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 ACBD6Q9BR61 282 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 MRGBPQ9NV56 204 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 DDX20Q9UHI6 824 aaKnown RBP7.07□□□□□ -1.28
VPS8-201ENST00000287546 ANAPC2Q9UJX6 822 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 ARHGAP26Q9UNA1 814 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 MOXD2PA6NHM9 499 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 RNF103O00237 685 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 ABLIM1O14639 778 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 PGAM1P18669 254 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 TYMPP19971 482 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 CTNNB1P35222 781 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 PRMT2P55345 433 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 MGAT5Q09328 741 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 FOXD4Q12950 439 aaPredicted RBP7.07□□□□□ -1.28
VPS8-201ENST00000287546 PDZD8Q8NEN9 1154 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 APOPT1Q96IL0 206 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 PTPN18Q99952 460 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 MANSC1Q9H8J5 431 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 INTS10Q9NVR2 710 aaKnown RBP7.07□□□□□ -1.28
VPS8-201ENST00000287546 HMGXB4Q9UGU5 601 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 SUN2Q9UH99 717 aa7.07□□□□□ -1.28
VPS8-201ENST00000287546 GNEQ9Y223 722 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms