RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ALDH9A1P49189 494 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 NME5P56597 212 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 DPYSL3Q14195 570 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 PSTKQ8IV42 348 aaKnown RBP18.87■□□□□ 0.61
PCDH1-201ENST00000287008 GALNT4Q8N4A0 578 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 PPP1R10Q96QC0 940 aaKnown RBP18.87■□□□□ 0.61
PCDH1-201ENST00000287008 TSC22D3Q99576 134 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 SLC2A4P14672 509 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 PSMA4P25789 261 aaKnown RBP18.87■□□□□ 0.61
PCDH1-201ENST00000287008 SKIV2L2P42285 1042 aaKnown RBP18.87■□□□□ 0.61
PCDH1-201ENST00000287008 CENPAP49450 140 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 FUT2Q10981 343 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 METTL6Q8TCB7 284 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 IL22Q9GZX6 179 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 SMIM28A0A1B0GU29 152 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 CA12O43570 354 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 FGBP02675 491 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 GUCA1AP43080 201 aaPredicted RBP18.87■□□□□ 0.61
PCDH1-201ENST00000287008 CHPFQ8IZ52 775 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 MAGEC3Q8TD91 643 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 CHST7Q9NS84 486 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 SCN3BQ9NY72 215 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 NDOR1Q9UHB4 597 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 L1RE1Q9UN81 338 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 MRC1P22897 1456 aa18.87■□□□□ 0.61
PCDH1-201ENST00000287008 KANSL1LA0AUZ9 987 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 PPP2R1BP30154 601 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.86■□□□□ 0.61
PCDH1-201ENST00000287008 LRRC8DQ7L1W4 858 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 PRDM12Q9H4Q4 367 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 ATRNO75882 1429 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 CALCAP01258 141 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 SP100P23497 879 aaPredicted RBP18.86■□□□□ 0.61
PCDH1-201ENST00000287008 RPL21P46778 160 aaKnown RBP18.86■□□□□ 0.61
PCDH1-201ENST00000287008 DPY30Q9C005 99 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 TMBIM4Q9HC24 238 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.86■□□□□ 0.61
PCDH1-201ENST00000287008 ZNF839A8K0R7 811 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 BTN3A1O00481 513 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 UBDO15205 165 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 KATNA1O75449 491 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 IL1BP01584 269 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 ALBP02768 609 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 MATKP42679 507 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 PIK3CGP48736 1102 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 SLC16A1P53985 500 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 CSTF3Q12996 717 aaKnown RBP18.86■□□□□ 0.61
PCDH1-201ENST00000287008 DUSP4Q13115 394 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 CCDC153Q494R4 210 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 WLSQ5T9L3 541 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 PLPP4Q5VZY2 271 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 C12orf56Q8IXR9 622 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 C12orf29Q8N999 325 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 ABTB1Q969K4 478 aaPredicted RBP18.86■□□□□ 0.61
PCDH1-201ENST00000287008 ZFYVE19Q96K21 471 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 DUSP16Q9BY84 665 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 EXOSC4Q9NPD3 245 aaKnown RBP18.86■□□□□ 0.61
PCDH1-201ENST00000287008 TGFB1I1O43294 461 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 B4GALT4O60513 344 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 HYIQ5T013 277 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 ERLEC1Q96DZ1 483 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 RNF157Q96PX1 679 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 ASB8Q9H765 288 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 TAS2R14Q9NYV8 317 aa18.86■□□□□ 0.61
PCDH1-201ENST00000287008 NDUFS2O75306 463 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 RASSF9O75901 435 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 BGNP21810 368 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 MRPS5P82675 430 aaKnown RBP18.85■□□□□ 0.61
PCDH1-201ENST00000287008 TBX2Q13207 712 aaPredicted RBP18.85■□□□□ 0.61
PCDH1-201ENST00000287008 C9orf57Q5W0N0 161 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 SCARA3Q6AZY7 606 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 VSTM1Q6UX27 236 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 OTOP2Q7RTS6 562 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 PHF13Q86YI8 300 aaPredicted RBP18.85■□□□□ 0.61
PCDH1-201ENST00000287008 OR56A4Q8NGH8 313 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 SEMA3CQ99985 751 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.85■□□□□ 0.61
PCDH1-201ENST00000287008 CRYL1Q9Y2S2 319 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 ADGRB2O60241 1585 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 GOLGA4Q13439 2230 aaKnown RBP18.85■□□□□ 0.61
PCDH1-201ENST00000287008 E9PBE3 544 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 NR5A2O00482 541 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 CLDN5O00501 218 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 KLHL41O60662 606 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 ATP4AP20648 1035 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 TRPC1P48995 793 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 IL2P60568 153 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 NOMO3P69849 1222 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 CRY1Q16526 586 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 CYP2A13Q16696 494 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 TDRD5Q8NAT2 981 aaKnown RBP18.85■□□□□ 0.61
PCDH1-201ENST00000287008 KLHL28Q9NXS3 571 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 PCDHGC5Q9Y5F6 944 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 FAM47E-STBD1D6RA91 191 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 XPO1O14980 1071 aaKnown RBP18.85■□□□□ 0.61
PCDH1-201ENST00000287008 BAIAP3O94812 1187 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 CCNB1P14635 433 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 ERCC2P18074 760 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 FMO4P31512 558 aa18.85■□□□□ 0.61
PCDH1-201ENST00000287008 CD86P42081 329 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms