RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 KLHL1Q9NR64 748 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 LRRC72A6NJI9 287 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 CCNT2O60583 730 aaKnown RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 DSG3P32926 999 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ALDH9A1P49189 494 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 SARSP49591 514 aaKnown RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 OTUD4Q01804 1114 aaKnown RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 LAMTOR4Q0VGL1 99 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 BMT2Q1RMZ1 405 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TBC1D25Q3MII6 688 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 Q4G0T1 1027 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 HECTD3Q5T447 861 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TYW3Q6IPR3 259 aaKnown RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 FAM92BQ6ZTR7 304 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 USP50Q70EL3 339 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 FAM131BQ86XD5 332 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ADGRG2Q8IZP9 1017 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ACTL9Q8TC94 416 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 RUSC1Q9BVN2 902 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 SPRTNQ9H040 489 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PHPT1Q9NRX4 125 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 INTS13Q9NVM9 706 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 NRCAMQ92823 1304 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 NR5A2O00482 541 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 XPO1O14980 1071 aaKnown RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 RGS14O43566 566 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 FTH1P02794 183 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 IFNA16P05015 189 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 RARGP13631 454 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 WARSP23381 471 aaKnown RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 S100A3P33764 101 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ATP5C1P36542 298 aaKnown RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ELP6Q0PNE2 266 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 DGKKQ5KSL6 1271 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PPP1R15BQ5SWA1 713 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 KLHL23Q8NBE8 558 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 UTP15Q8TED0 518 aaKnown RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 HTR3CQ8WXA8 447 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PPP1R36Q96LQ0 422 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 MAGEB18Q96M61 343 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 FAM126AQ9BYI3 521 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ROGDIQ9GZN7 287 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 SENP6Q9GZR1 1112 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 C3orf14Q9HBI5 128 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 AASDHPPTQ9NRN7 309 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 RBM22Q9NW64 420 aaKnown RBP eCLIP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 BTBD3Q9Y2F9 522 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 LRRC7Q96NW7 1537 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 MYPNQ86TC9 1320 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 LOC102724159A0A0B4J2E5 919 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PDHXO00330 501 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 CES2O00748 559 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 KLHL41O60662 606 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ERBB2P04626 1255 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 CSF1RP07333 972 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TSPAN19P0C672 248 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 HSMCR30P0CW71 290 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 IGFBP4P22692 258 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 IRX1P78414 480 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 MRPS25P82663 173 aaKnown RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ADIGQ0VDE8 80 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 PWP2Q15269 919 aaKnown RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TEAD4Q15561 434 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 RFX4Q33E94 735 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 VPS26BQ4G0F5 336 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ACAD10Q6JQN1 1059 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ZBTB49Q6ZSB9 765 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TMEM26Q6ZUK4 368 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 BRSK2Q8IWQ3 736 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 DLG3Q92796 817 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 SPACA7Q96KW9 195 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 YIPF3Q9GZM5 350 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 CISHQ9NSE2 258 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF232Q9UNY5 417 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 SORCS3Q9UPU3 1222 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 TRIM17Q9Y577 477 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 ACTL7BQ9Y614 415 aa4.14□□□□□ -1.75
SCN3A-201ENST00000283254 MFN2O95140 757 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 LDLRP01130 860 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CPA3P15088 417 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 TCN1P20061 433 aaPredicted RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 TUBP50607 506 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ARHGDIBP52566 201 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 CRYMQ14894 314 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 LSM12Q3MHD2 195 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF605Q86T29 641 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 TMC8Q8IU68 726 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 EID3Q8N140 333 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 SRFBP1Q8NEF9 429 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ZNF671Q8TAW3 534 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 MYLPFQ96A32 169 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 HAVCR1Q96D42 359 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ACOX2Q99424 681 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 TRIM2Q9C040 744 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 MAF1Q9H063 256 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ABCC13Q9NSE7 274 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 RBM12Q9NTZ6 932 aaKnown RBP4.13□□□□□ -1.75
SCN3A-201ENST00000283254 ITGB1BP2Q9UKP3 347 aa4.13□□□□□ -1.75
SCN3A-201ENST00000283254 NPHP3-ACAD11A0A0J9YXS1 232 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms